Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00732 ATGGAAGGAGAGAGAGCTGCTGCTACCAATTATGATCTTCAAGTTTCCTTCTCCAACACCCCACAACCCATACACGAATTGGGTTTTGTTCACTATGAAGAAAACCAGCTCCTTGGTTTCTTGTCACCCTCTTCACAATCTCAATCCTTAAACTCCGATGTTGTTGTTACTTCTGCCACTACAACTGCTCCAACCATCGGATTCATGAATCACACTCAACTTCTCACCAAAACTTGGAATAACGACCAGGTCGAAACTCTGGATCCAAAGGCTGTCGACGAAGAAAACTGCACTGGAAACGCTAGTGAAGGCAACAACAACTCTTGGTGGAGGAGCGCAGCTTCGGAGAAGAACAAGGTGAAAATAAGAAGGAAGCTAAGAGAACCAAGGTTTTGTTTTCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTACCGTTGCACCCACAACAACTGCAGGGTGAAGAAGAGAGTTGAACGACTCTCAGAGGATTGTCGTATGGTCAATGTTGGTCGTTAG 582 0.4399 MEGERAAATNYDLQVSFSNTPQPIHELGFVHYEENQLLGFLSPSSQSQSLNSDVVVTSATTTAPTIGFMNHTQLLTKTWNNDQVETLDPKAVDEENCTGNASEGNNNSWWRSAASEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVNVGR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00732 193 Pfam WRKY DNA -binding domain 143 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu6g00732 193 Gene3D WRKY domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu6g00732 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 189 IPR044810 GO:0003700
Vimu6g00732 193 FunFam WRKY transcription factor 57 128 192 - -
Vimu6g00732 193 SMART WRKY_cls 142 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu6g00732 193 ProSiteProfiles WRKY domain profile. 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu6g00732 193 SUPERFAMILY WRKY DNA-binding domain 134 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00732 Vimu-Chr6 8352039 8356966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00732 3 189 WRKY Transcription Factor Family AT2G44745 56.061 3.85e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vimu6g00732 WRKY 6.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00732 - - gmx:100170677 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00732 6 8352039 8356966 Vimu6g00732 6 8352039 8356966 ECH