Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00697 TTGGTAAAGATGGTTGAGGGTAGCCAAGTTTTCAGTTCTCATGTTATAGTTAGTTTCTTTCTGCTGGTTTTCTGTGGCATGGTTTGTGGGACTGATAGTGATATATCCTGCTTGAAAAGTGTAAAGGAAGCACTTCAGGACCCTTTCAAGTATTTGCAATCCTGGGATTTCAGCAACAAAACAGAAGGGAGTATATGCAAGTTCACTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTGAAACTGTCGAACATGGGACTCAAGGGTGAGTTTCCACGCGGCATTAAAAATTGCTCAAGCATGACAGGATTGGATTTTTCACTTAACAGACTCTCTAACACCATTCCAGCAGATATATCCACACTTCTTACATATGCGACAAGCATTGATCTATCCTCAAATGATTTTACCGGGGAAATACCTGCTTCCCTCTCAAACTGTACCTATCTTAATACTCTCAGACTTGATCAAAACCAACTCTCTGGTCAAATTCCTTCAAACTTGAGCCAGCTCCCGCGGCTTAAGGCTTTTAGTGTTTCCAATAATCTTTTGACAGGGCAGGTTCCAGCCTTTAAAGCAGATGTGGCTGATGCAGCAAGTTATGCAAATAATTCTGGCCTGTGTGGTGGTCCCTTGGATGCTTGCCATGCCAACTCTGCAAAGAGTAACACTGCTGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACAGTTGCAGCATTAGGTTTGGGCATTGGAATGTTCTTCTACGTGCGCCGTATTTCTTATAGGAAGAAGGAAGAGGACCCAGAAGGAAACAAGTGGGCAAGAAGTCTGAAGGGAACCAAAACAATAAAGGTTTCTATGTTTGAGAAGGAAATTTCAAAAATGAACTTGAATGATCTCATGAAGGCAACTAATAACTTCAGTAATAGCAATATTATTGGGACTGGAAGATCAGGCACTGTTTACAAAGCTGTCCTTCCTGATGGCACATCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTATGTCTGAGATGGCTATACTAGGGACTGTCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGTCTGGCTAAAAGGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTTCATCCTGAGGCAGGCGTGTGCACCATGGATTGGGCTGTAAGGCTCAAAATTGCAATTGGCGCAGCCAAAGGGTTGGCATGGCTTCATCATAGCTGCAATCCCCGTATTCTCCATCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGTCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTGGGTTATGTTGCTCCTGAATATACAAAAACTTTGGTGGCTACTCCTAAAGGGGATATTTATAGCTTTGGGACCGTGCTTCTTGAGCTGGTGACAGGTGAAAGACCTACTCATGTGGCTAAAGCTCCAGAAACTTTCAAGGGAAATTTGGTTGAATGGATTTCACAGCAATCTAGCAATGCAAAACTCCATGCTGTCATTGATGAATCATTACTTGGGAATGGAGTAGACCAGGAAGTTTTCCAATTTCTGAAGGTTGCATGCAATTGTGTTTCAGAAATGCCAAAGGAGAGGCCTACCATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGCTTGAATTATAATTTCACTGTTGAGGATGAGATAATGCTGCCTGTAGACTCTGGTGACGCTGAGAACTTAGAAGAACTTATTGTAGCTCGAGAGGGACATAACTGA 1854 0.4245 MVKMVEGSQVFSSHVIVSFFLLVFCGMVCGTDSDISCLKSVKEALQDPFKYLQSWDFSNKTEGSICKFTGVECWHPDENRVLNLKLSNMGLKGEFPRGIKNCSSMTGLDFSLNRLSNTIPADISTLLTYATSIDLSSNDFTGEIPASLSNCTYLNTLRLDQNQLSGQIPSNLSQLPRLKAFSVSNNLLTGQVPAFKADVADAASYANNSGLCGGPLDACHANSAKSNTAVIAGAAVGGVTVAALGLGIGMFFYVRRISYRKKEEDPEGNKWARSLKGTKTIKVSMFEKEISKMNLNDLMKATNNFSNSNIIGTGRSGTVYKAVLPDGTSLMVKRLQESQHSEKEFMSEMAILGTVKHRNLVPLLGFCLAKRERLLVYKNMPNGTLHDQLHPEAGVCTMDWAVRLKIAIGAAKGLAWLHHSCNPRILHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLVATPKGDIYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWISQQSSNAKLHAVIDESLLGNGVDQEVFQFLKVACNCVSEMPKERPTMFEVYQLLRAIGLNYNFTVEDEIMLPVDSGDAENLEELIVAREGHN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00697 617 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Vimu6g00697 617 FunFam Leucine-rich repeat receptor-like protein kinase 380 589 - -
Vimu6g00697 617 SUPERFAMILY Protein kinase-like (PK-like) 282 580 IPR011009 -
Vimu6g00697 617 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Vimu6g00697 617 Pfam Protein tyrosine and serine/threonine kinase 308 578 IPR001245 GO:0004672|GO:0006468
Vimu6g00697 617 SUPERFAMILY L domain-like 32 195 - -
Vimu6g00697 617 Gene3D Transferase(Phosphotransferase) domain 1 380 594 - -
Vimu6g00697 617 Gene3D Phosphorylase Kinase; domain 1 266 378 - -
Vimu6g00697 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 50 194 - -
Vimu6g00697 617 FunFam Leucine-rich repeat receptor-like protein kinase 31 194 - -
Vimu6g00697 617 ProSiteProfiles Protein kinase domain profile. 305 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g00697 617 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00697 Vimu-Chr6 8086638 8088697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00697 21 593 Receptor kinase-like Gene Family AT3G28450 45.250 1.15e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vimu6g00697 PK_Tyr_Ser-Thr 2.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00697 - - gmx:100817267 1063.52