Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00653 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCACTTCACCCTCTACATCTTTTAGGAAGCACAAGAGCAACGCCAAGAAGAGGCTTGGATCAAGGACTTCTTCCTTTGAGTATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGTACCAACCAGGATGCCATGGTGGTTTGGGAGAACTTTTGTTCAAGACAGGATACTACTTTCTGTGGAGTTTTTGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGAGATTCTCTTCCTCTTAAACTGAATGCCCATTGGGAAGTTAATGTTCCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATGCTGCAGGAAGCATGAATATACAAGAGGCTGCCTCTGCTTCTGCTGATGAGGATTCTCGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATAGTGGCAGCCACATCAAGGCGTGCCTCGGCTGCTCGAGCGCTGGTCGAGTCAGCAGTTCGCGCTTGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTTTGGACTCTGCCTCACACAAAGTATGCAGTGCTTCCATTGCCAAGTCCAAGGAGCAACCTGGTTCGGCTGTCCAAGTCCACAATGGCCACAATGGCGACAGGGGAGACGTTTCGGCCCCGACCGGTCTGGCAAGGTCAGGAACATGCAGGGAGAGCGATGAAAGTGATGACACCAACAAGAATGAGGAGGAGAAAGAGACTAGGGAAGAGGAAATAGATCCTGAGTCAGAAATAGAATGGTCTGCTCTTGAAGGAGTTTCTCGTGTGAACACATTGCTAAACCTGCCAAGGTTTGAACCTGAGAAAGAAGACAAGGGGATGAGAAAACAAAATTGA 972 0.4938 MGSCFSAESRSPHPTSPSTSFRKHKSNAKKRLGSRTSSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTTFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEVNVPGEEVLKEISVNAAGSMNIQEAASASADEDSRIWDVLSNKEVVDIVAATSRRASAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSASHKVCSASIAKSKEQPGSAVQVHNGHNGDRGDVSAPTGLARSGTCRESDESDDTNKNEEEKETREEEIDPESEIEWSALEGVSRVNTLLNLPRFEPEKEDKGMRKQN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00653 323 SUPERFAMILY PP2C-like 54 126 IPR036457 -
Vimu6g00653 323 MobiDBLite consensus disorder prediction 261 279 - -
Vimu6g00653 323 Gene3D - 158 222 IPR036457 -
Vimu6g00653 323 MobiDBLite consensus disorder prediction 1 22 - -
Vimu6g00653 323 PANTHER PROTEIN PHOSPHATASE 34 136 IPR015655 GO:0004722|GO:0006470
Vimu6g00653 323 MobiDBLite consensus disorder prediction 1 32 - -
Vimu6g00653 323 SUPERFAMILY PP2C-like 160 214 IPR036457 -
Vimu6g00653 323 Gene3D - 54 157 IPR036457 -
Vimu6g00653 323 MobiDBLite consensus disorder prediction 227 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00653 Vimu-Chr6 7678517 7681658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00653 160 314 PP2C-type Phosphatase Gene Family AT3G02750 55.769 6.27e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00653 - - gmx:100790373 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00653 6 7678517 7681658 Vimu6g00653 6 7678517 7681658 ECH