Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00642 ATGACCGGGAAGGCGAAGCCCAAGAAGCACACGGCTAAGGAGATCGCGGCAAAGATCGACGCCGCCACTACCAACCGCGGCGGCGGTAAGGCGGGCCTGGCGGATCGGTCTGGTGTGGAGAAAGGCGGGCACGCGAAATACGAGTGCCCGCTCTGCAAAGTCACGGCGCCTGATGTGAAATCGATGCAGATTCATCACGAGGCGCGTCACCCTAAGATCCCCTTTGAGGAGGACAAGGTCATCAACCTTCACGCCACAATTGCTAGCGAATCGTCGAAGGCGCGTCCAGGCATTCGCGGAAGCCACAAGAAATGA 315 0.5937 MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGLADRSGVEKGGHAKYECPLCKVTAPDVKSMQIHHEARHPKIPFEEDKVINLHATIASESSKARPGIRGSHKK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00642 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 28 77 - -
Vimu6g00642 104 PANTHER GEO09665P1-RELATED 1 79 IPR045230 -
Vimu6g00642 104 MobiDBLite consensus disorder prediction 18 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00642 Vimu-Chr6 7579827 7580141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00642 1 104 C2H2 Transcription Factor Family AT3G02790 74.286 3.59e-52 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00642 6 7579827 7580141 Vimu6g00642 6 7579827 7580141 ECH