Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00616 ATGGCTTCCCACATTGCTCTTTTTGGAGCCCCTCCTCTTTCAATTTCCACACAACGCTTCCATGCAAAGCAAAGTTGCATAAACGGGCTCAAATTCCCCACTACCACCACCACTTCTTCTTCTTCTTCTTCTTGCTTTCCATACTCCATAACAACACAGAGAGGGTCTTTTTCCTCAGTGATTGCTTGTTCCTCTTCAAATGGAAGAGACCCGGGTTCGGTGGATGATGAAGAGCTACAAAAGGAACTCATTGACGAAGAGAAACGACGAGCTGCATTGTTTGCGAGGATTGCCTCAGGGGAATTCACCGTTAGGCAAAAATCTCTTTATCTTTCTACACTGGAGGGATTGGCAAAGGTGGGGGTGCCCAATGAAGTTCTGGAGTTTTTGTTTGGTTGGGTTGAAAGGGGTGGTGTGTACGCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTCTTCATTCCCTTGTATGAACTTTACCTTACGTATGGTGGGATTTTTAGGTTGACGTTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCAACTATTGCAAAACACATATTGAAAGACAATTCAAAGGCTTATTCAAAGGGCATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAAATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTGCACCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCCGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCCGATGGAGAAGACGCTGAGATGGAATCACTTTTCTCACGATTGACCTTAGATATCATTGGAAAAGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACCGGTATAGTTGGGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATATATCACCACGTTTAAGGAAGGTTAATGAAGCTCTCAAATTGATCAACGATACGCTTGATGATCTGATAGCAATATGCAAGAGAATAGTGGATGAAGAAGAGTTACAGTTTCATGAAGAGTACATGAATGAAAAAGATCCAAGTATTCTACACTTCTTGTTAGCATCAGGAGATGATGTATCAAGTAAGCAACTTCGTGACGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTACTATCCAAGGTTGACTCTGTACTTGGAGATAGACATCCAACTATTGAAGACATGAAGAAACTCAAATATACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCGCAACCACCTGTGTTGATTCGTCGCTCTCTTGAGAATGATGTTCTTGGAGAGTACCCTATAAAGAGAGGTGAAGATATATTTATATCTATCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCTGACAAGTTTGAGCCTGAAAGGTGGCCATTAGATGGACCAAATCCTAACGAGACTAATCAAAGCTTCAAATATCTTCCGTTTGGAGGAGGACCACGGAAATGTGTAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCTCTTGCAATGCTTGTTAGACGGTTCAACTTTCAGATGGCAATTGGAGCTCCACCTGTTGATATGACTACTGGAGCTACAATTCATACGACACAAGGCTTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTACCATCATTACAGATGTCAACTTTGGAAGTGGATCCATCCGTAAGCCTTTCTGATCAGGATGAAATAACTCAGAAAGGACAAGTTTATCAGGCTTAG 1878 0.4233 MASHIALFGAPPLSISTQRFHAKQSCINGLKFPTTTTTSSSSSSCFPYSITTQRGSFSSVIACSSSNGRDPGSVDDEELQKELIDEEKRRAALFARIASGEFTVRQKSLYLSTLEGLAKVGVPNEVLEFLFGWVERGGVYAKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILKDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVGAVYTVLREAEDRSVSPIPVWDIPIWKDISPRLRKVNEALKLINDTLDDLIAICKRIVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSVLGDRHPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGEYPIKRGEDIFISIWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQSFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAIGAPPVDMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSVSLSDQDEITQKGQVYQA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00616 625 CDD CYP97 160 582 - -
Vimu6g00616 625 PRINTS E-class P450 group I signature 280 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 396 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 525 535 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 535 558 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 166 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 487 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS E-class P450 group I signature 447 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS P450 superfamily signature 535 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS P450 superfamily signature 407 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 PRINTS P450 superfamily signature 526 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 528 537 IPR017972 GO:0005506|GO:0016705
Vimu6g00616 625 PANTHER CYTOCHROME P450 FAMILY 4 162 588 - -
Vimu6g00616 625 Pfam Cytochrome P450 164 570 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 SUPERFAMILY Cytochrome P450 157 588 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g00616 625 Gene3D Cytochrome P450 146 594 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00616 Vimu-Chr6 7329683 7342481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00616 68 611 Cytochrome P450 AT1G31800 78.075 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00616 K15747 - gmx:100780770 1103.58