Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00613 ATGAGGGAGCCTAAGCCCAGTTTTGTGTTTCCATTTCCTTTCATGTTCTTCATTGCTCATTGGTTTCTGTTGGTTATTCATGGCAGTGCTGCTGAGAGTTCCACATATATAGTCCACATGGACAAATCCCTGTTTCCTCGAGTTTTCACCACCCATCATGATTGGTTTGAATCCATCATTGATTCCTCTAAATCGGCAACACTTGGTAACTCATCCATACAATCACAGAAAGTGTACTCCTATAGCCAAGCCATGTATGGCTTCAGTGCAGTTCTAACATCAGAAGAGTTAGAGGCTGTCAAAAGCTCCCTTGGCTTTGTTGCAGCATATCCAGACAGAACTGCCACCATAGACACCACTCACACTTTTGAGTTTCTCTCCCTAGACTCTTCCAGTGGTCTGTGGCATGCATCAAATTTTGGGGAGGATGTCATTGTGGGTGTTATTGACACTGGTGTGTGGCCTGAGAGTGAAAGCTTCAAAGATGATGGCATGACCAAGAAAATTCCAAGTAAATGGAAAGGAACCTGTCAGGAAGGGCAAGATTTCAACACTTCCATGTGTAACTTCAAACTGATCGGAGCTAGATATTTCAACAAAGGAGTGATTGCTGGAAACCGTAAGGTTAAAATCAGTATGAACTCAGCTAGAGATACAGAGGGTCATGGAACTCACACATCTTCCACAGCTGCTGGCAACTATGTCAGTGGAGCCTCTTACTTTGGCTACGCTAAAGGGGTGGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCATTTGGGAAGAGGGTCGTTACTCCTCTGATGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATCTCTATGGGGTTTGATGGTGTGCCACTTTATGAGGATCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCCTCTGCAGGTAATGGTGGTCCTGATCTTGGTACTCTGCACAATGGAATCCCCTGGCTTCTTACCGTGGCTGCAGGTACCATTGACCGAACATTTGGTTCTCTAATTCTTGGAAATGGCCAAACCATTATTGGATGGACCTTGTTTCCTGCAAACGCAATAGTGGAAGACTTTCCACTTATCTACAATAAGAATACATCAGCCTGTAACTCAGTGAAGTCGTTATCCGAAGTGGCCGAAGGGATCATTGTATGTGATCCAGTTTCAGACCCTGAGTTAGTGTTTGAACAAAGGAGGTTTGTTAGAGAAGCCAATTTATTTGGGGCAGTATTTATCTCTGATAAACCATTAGTAACTGAAGGACATGCCAGCTCTCCAAGTATTGTAATCAGTGCAAAGGATGCACCATCTGTGATCAAATATGCAAAAAGCCATAAGAATCCAACAGCCAGTATCAAATTTCAGCAAACATTTGTTGGAATAAAGCCAGCACCAGGTCTTGCTGGTTACTCTTCAAGAGGTCCTTCACCTAGCTACCCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAGAGTCCTTGCTGCTTTCATTCCTGATACTCCAGCAGCTGCAATTGGCAACAATGTGTACTTACCTACTGACTACAATTTGCTGTCTGGAACATCCATGGCCTGTCCTCATGCTTCTGGTGTTGCTGCTCTTCTGAAAGCTGCACACCCTGAATGGAGTGCTGCTGCTATAAGATCTGCACTAGTAACCACAGCCAGTCCTCTAGATAATACAAAAAATCCAATTAGAGACTATGGCTATCCTTCTCAATATGCTTCCCCTCTTGACATGGGAGCTGGTCAAATTGACCCTAACAGAGCCCTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTACGTTAATCTCCTTTGTGCTTTGAATTACACACAAAAACAGATCTTAACCATTACAAGATCAGGTTCCTATAATTGTGCTAAACCATCGTTTGATCTTAACTACCCTTCATTTATAGCTCTCTACAGCAACAAAACAATGTCGGTCGTCCACAAATTTAAGAGGACAGTGACCAATGTTGGAGGTGGTCCTGCCATATACAGAGCCAAGGTGACAGAACCTAAGGGTTCTGTGCTGACAGTGTCACCTGAGACATTATCATTCAGATACAAAAATGAGAAGCTAAGCTACGATGTGCTGATAAAGTATAGCAAGTACAAGAAGGAAAATATCTCGTATGGGGATCTTGTTTGGATGGAAGATGGTGGAACACACAGTGTTAGGAGCCCCATTGTCGTGGCACCAAGTGGAATTGTATGA 2292 0.4411 MREPKPSFVFPFPFMFFIAHWFLLVIHGSAAESSTYIVHMDKSLFPRVFTTHHDWFESIIDSSKSATLGNSSIQSQKVYSYSQAMYGFSAVLTSEELEAVKSSLGFVAAYPDRTATIDTTHTFEFLSLDSSSGLWHASNFGEDVIVGVIDTGVWPESESFKDDGMTKKIPSKWKGTCQEGQDFNTSMCNFKLIGARYFNKGVIAGNRKVKISMNSARDTEGHGTHTSSTAAGNYVSGASYFGYAKGVARGIAPRARLAMYKVIWEEGRYSSDVLAGMDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVVVSSSAGNGGPDLGTLHNGIPWLLTVAAGTIDRTFGSLILGNGQTIIGWTLFPANAIVEDFPLIYNKNTSACNSVKSLSEVAEGIIVCDPVSDPELVFEQRRFVREANLFGAVFISDKPLVTEGHASSPSIVISAKDAPSVIKYAKSHKNPTASIKFQQTFVGIKPAPGLAGYSSRGPSPSYPGVLKPDIMAPGSRVLAAFIPDTPAAAIGNNVYLPTDYNLLSGTSMACPHASGVAALLKAAHPEWSAAAIRSALVTTASPLDNTKNPIRDYGYPSQYASPLDMGAGQIDPNRALDPGLIYDATPQDYVNLLCALNYTQKQILTITRSGSYNCAKPSFDLNYPSFIALYSNKTMSVVHKFKRTVTNVGGGPAIYRAKVTEPKGSVLTVSPETLSFRYKNEKLSYDVLIKYSKYKKENISYGDLVWMEDGGTHSVRSPIVVAPSGIV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00613 763 CDD Peptidases_S8_3 116 577 IPR034197 -
Vimu6g00613 763 CDD PA_subtilisin_like 353 471 - -
Vimu6g00613 763 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vimu6g00613 763 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vimu6g00613 763 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Vimu6g00613 763 ProSiteProfiles Serine proteases, subtilase domain profile. 122 612 - -
Vimu6g00613 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 757 IPR045051 -
Vimu6g00613 763 Pfam Subtilase family 141 589 IPR000209 GO:0006508|GO:0008236
Vimu6g00613 763 FunFam Subtilisin-like protease SBT1.5 143 356 - -
Vimu6g00613 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 117 IPR037045 -
Vimu6g00613 763 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Vimu6g00613 763 SUPERFAMILY Subtilisin-like 118 616 IPR036852 GO:0004252|GO:0006508
Vimu6g00613 763 Gene3D Peptidase S8/S53 domain 143 625 IPR036852 GO:0004252|GO:0006508
Vimu6g00613 763 FunFam Subtilisin-like protease SBT1.9 25 118 - -
Vimu6g00613 763 Pfam Peptidase inhibitor I9 35 115 IPR010259 -
Vimu6g00613 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vimu6g00613 763 Gene3D - 629 759 - -
Vimu6g00613 763 Gene3D - 348 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00613 Vimu-Chr6 7309024 7311315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00613 14 760 Subtilisin-like Serine Gene Family AT5G67090 43.734 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00613 - - var:108328904 1439.09