Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00612 | ATGGAGCTTCACAAGCTCAATATTCTCATCACAATCCTGTTCCTATATTTGTTCCCTCATTCACAAAATTGCCAACAAATATACCTCAACAACACTGTCTATGACTGCTATAATGACCGTTCTGTAGCAAAAGGATATCTTTGCAATGGCCTTCAAGATTCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTATGACAACCCTCTGATGATTGCTAACCTTCTTGGCTCTGAAACATCTGATATAACCTCAATCAACAATATCTCAACAACTGAGAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTCTTCTGTTCATGTAATGGAAACATCTATCAGTATGAATCACTTTACTATGTCAAAGAAAATGATACCTACTGGGTCTTGGTAAGAGAAACTTTCCGAGGCCTCACCACCTGTCAAGGAATTATGGGTCAAAATTACTATCCTCAAACTACTTTTTCAATTGGTTCAGAGCTCAAGGTTCCAATGTTATGTGCTTGTCCCACTGCAAATCAGACAGAAAGAGGGGTCACCTCTTTGATGGTTTACTCTGTCATCTCTGGTGACAGTGTTAAGTCCATAGGAGAGGCTTATGACGTGGATGAACAAAGTATACTAGAGGCCAATAAGTTGTCCGAGTCACAGAGTGCAAACAGCAGCATGCTTCTCCCTGACTTCACACCTATTTTAGTTCCTCTAATAGGGAAGAACTGCAAAGAGAATCCCGATAAATTCTACTGTAAATGTTACAGAGAACCACCAACAGATGGAAGCTCCAAGGGGCTATTATGTGATGAATCTGGTGGCAATGAATTTCCTGTCAGATTGGTTGTTGCTTTAGGTGTTGGACTTGGTTTAGGCTTTGTGTGTTTGTTTCTTCTGGGATACAAATCATATCAGTACATACAGAAGAAGAGAGAAAGTATCCGAAAGGAAAACCTTTTCAGGAGAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCATCTTACGGAAATGGAGAAATGGCAAAGCTTTTTACAGCCGAGGAGCTGCAAAGAGCAACAGATAACTACAACAGCAGTAGGTTTCTTGGTCAGGGTGGCTTTGGCACAGTGTACAAAGGAATGTTACCTGATGGAAGCATAGTTGCAGTTAAAAGGTCCAAAGAAATTGAAAGGAACCAGATAGAGACTTTTGTGAATGAAGTGGTGATTCTATCACAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGTCTTGAGACAGAAACTCCTTTACTAGTCTATGAATTCATTCCAAACGGAACACTCTCTCACCATATCCACAGGAGAGACAGTGAGCCATCCCTTTCATGGGAGAGTCGCGTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTGCAGCTTCTATTCCCATTTTCCATAGAGACATAAAACCTACCAATATACTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGATAAGACTCACTTGACCACAGCTGTGGGAGGAACTTTTGGGTACATTGACCCTGAATATTTTCAGTCTAGTCAGTTTTCAGATAAAAGTGATGTGTACAGTTTTGGGGTAGTGCTGATAGAACTTATAAGTGGGAGAAAGCCGATTTCCTTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCAGAGTTTCTTTCTGTGATGAAGGAGAACAAAGTTTATGAGATTTTAGATGGCAGGGTTGTTAAGGAAGCAAGGAAAGATGAGATTCTTGCAATTGCAAACCTTGCAAAGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCATTGGAACTAGAAGCATTGAGAAAGCTCCAAAGTTCCTTAGAGATCAACCATGATCATGAGTATACAACTAGCGAGACAGTTCAAGAAATCACAGATGAAAGCATGCCACTGTTCTTTCAACTGGACTCCACATCCTTCTAG | 2007 | 0.4051 | MELHKLNILITILFLYLFPHSQNCQQIYLNNTVYDCYNDRSVAKGYLCNGLQDSCTSFLVFRSKSPYDNPLMIANLLGSETSDITSINNISTTEKIPSNKSIIVPVFCSCNGNIYQYESLYYVKENDTYWVLVRETFRGLTTCQGIMGQNYYPQTTFSIGSELKVPMLCACPTANQTERGVTSLMVYSVISGDSVKSIGEAYDVDEQSILEANKLSESQSANSSMLLPDFTPILVPLIGKNCKENPDKFYCKCYREPPTDGSSKGLLCDESGGNEFPVRLVVALGVGLGLGFVCLFLLGYKSYQYIQKKRESIRKENLFRRNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNSSRFLGQGGFGTVYKGMLPDGSIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEFIPNGTLSHHIHRRDSEPSLSWESRVRIACEVAGAVAYMHFAASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLIELISGRKPISFLEEDEGQNLIAEFLSVMKENKVYEILDGRVVKEARKDEILAIANLAKRCLRLNGKKRPTMKEVSLELEALRKLQSSLEINHDHEYTTSETVQEITDESMPLFFQLDSTSF | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00612 | 668 | SMART | serkin_6 | 355 | 628 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00612 | 668 | Gene3D | Transferase(Phosphotransferase) domain 1 | 431 | 653 | - | - | |
Vimu6g00612 | 668 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 476 | 488 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu6g00612 | 668 | FunFam | Wall-associated receptor kinase 2 | 326 | 430 | - | - | |
Vimu6g00612 | 668 | Pfam | Protein kinase domain | 355 | 621 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00612 | 668 | Gene3D | Phosphorylase Kinase; domain 1 | 326 | 430 | - | - | |
Vimu6g00612 | 668 | FunFam | Wall-associated receptor kinase 2 | 431 | 648 | - | - | |
Vimu6g00612 | 668 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 113 | 632 | IPR045274 | GO:0007166 | |
Vimu6g00612 | 668 | CDD | STKc_IRAK | 361 | 628 | - | - | |
Vimu6g00612 | 668 | ProSitePatterns | Protein kinases ATP-binding region signature. | 361 | 383 | IPR017441 | GO:0005524 | |
Vimu6g00612 | 668 | ProSiteProfiles | Protein kinase domain profile. | 355 | 628 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00612 | 668 | Pfam | LysM domain | 187 | 218 | IPR018392 | - | |
Vimu6g00612 | 668 | Coils | Coil | 618 | 638 | - | - | |
Vimu6g00612 | 668 | SUPERFAMILY | Protein kinase-like (PK-like) | 338 | 625 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00612 | Vimu-Chr6 | 7302221 | 7305110 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00612 | 282 | 629 | Receptor kinase-like Gene Family | AT1G16130 | 58.286 | 2.78e-142 | 431 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vimu6g00612 | Pkinase | 9.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00612 | - | - | vun:114186184 | 1050.81 |