Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g00608 | ATGAATGCATTAGATCTTAAACAGCACTACCAAATTGACTCTGTCTTCTCCAGAGACAACAGGTTCATGGAGTTTCATCCTTACCTTTACATTCTCTGCATAATTCTGTTCTTACAGATGTTTCCTGAATCTGCTAACTCTCAGCAAGCATACCTCAACAGCACTGTCTATGACTGCTCTGAGAACCCTTCTGCACCAAAAGGATACCTCTGCAATGGCCTTAAAAAATCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTATGACAACCCTGTAAGCATTGCCTACCTTTTTGGCTCTGAAGCATCTACCATAGCCTCAATAAACAACATCTCAAAAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTTCTGGAAATATCTACCAGCATATCACACCTTACACTGCCACCAAGAACGACACCTACTTCAAGTTGGTTACAGAAATTTACCAAGGCCTCACCACCTGCCAGGCCCTGATGGGTCAGAATTACTATGCCTCTGGTGCAATTAGCGTTGGTGCTGAGCTCACAGTTCCAGTAGTATGTGCTTGTCCCACTGAAAATCAGACAGCAAGAGGGGTCACTTCCTTGCTGGTTTACTCAGTGAAAAATGGTGATACTGTTAAGTCCATTGGAGAGGCTTATGGTGTTGATGAACAAAGTATTCTAGAGGCCAACGGGTTGTCAGTGCCGCCAACTGCAGACAATATCATAATCATCTATGCCACAACTCCTATCTTGGTTCCTCTCAGAGGGAAGAGTTGCAAAGAGGACCCTGATAGTTTCTATTGTACTTGCTCCCAGGGAAGCGTTGAGGATGGAACCTTCATGGGGTTCCAATGTAATGAATCTGATGCTGAAACTTTTCCTACCAAATTGGTTGCTTCCTTAGGTGTCGGACTTGGTGTAGGCTTTGTGTGTTTGTTTCTTCTGGGATACAAATCATATCAGTACATACAGAAGAAGAGAGAAAGTATCCGAAAGGAAAACCTTTTCAGGAAAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCTTATTATGGGAATGGAGAAATGGCAAAGCTGTTTAAAGCTGAGGAGCTACAGAAAGCAACAGATAACTATAACAGAAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACAGTGTATAAAGGAATGCTACCAGATGGAACCATTGTTGCTGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAGAGACTTTTGTGAATGAAGTGGTGATTCTATCCCAGATCAACCACAGAAACATTGTCAAACTCTTTGGCTGTTGTCTTGAGACAGAAACTCCTTTACTAGTCTATGAATTCATTCCAAATGGAACACTATCTCACCATATCCACAGGAGAGACAATTTGCCCTCCCTTTCATGGGAGAGTCGCCTTAGAATTGCATGTGAGATTGCTGGAGCAGTGGCATATATGCATTTTGCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTCTTAGACAACAACTTCAGTGTCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGATAAGACTCACTTGACCACAGCTGTGGGAGGAACTTTCGGGTACATTGACCCTGAATATTTTCAGTCTAGTCAGTTTTCAGATAAAAGTGATGTGTACAGTTTTGGCGTAGTACTGGTAGAACTTATAAGTGGGAGAAAGCCAATTTCCTTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCAGAGTTTCTTTCTCTGATGAAGGAGAATAAAGTTTATGAGATTTTAGATGGCAGGGTTGTTAAGGAAGCAAGGAAAGATGACATTCTTGCAATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCATTGGAACTAGAAGCATTGAGAAAGCTCCAAAGTTCCTTAGAGATCAACCATGATCATGAGTATACAACTACCGAGACGGTTCAAGAAATCACAGATGAAAGCATGCCACTGTTCTTAGAACTGGACTCCACATCCTTTTAG | 2076 | 0.4147 | MNALDLKQHYQIDSVFSRDNRFMEFHPYLYILCIILFLQMFPESANSQQAYLNSTVYDCSENPSAPKGYLCNGLKKSCTSFLVFRSKSPYDNPVSIAYLFGSEASTIASINNISKDDKIPSNKSIIVPVFCSCSGNIYQHITPYTATKNDTYFKLVTEIYQGLTTCQALMGQNYYASGAISVGAELTVPVVCACPTENQTARGVTSLLVYSVKNGDTVKSIGEAYGVDEQSILEANGLSVPPTADNIIIIYATTPILVPLRGKSCKEDPDSFYCTCSQGSVEDGTFMGFQCNESDAETFPTKLVASLGVGLGVGFVCLFLLGYKSYQYIQKKRESIRKENLFRKNGGYLLQEKLSYYGNGEMAKLFKAEELQKATDNYNRSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFIPNGTLSHHIHRRDNLPSLSWESRLRIACEIAGAVAYMHFAASIPIFHRDIKPTNILLDNNFSVKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPISFLEEDEGQNLIAEFLSLMKENKVYEILDGRVVKEARKDDILAIANLAMRCLRLNGKKRPTMKEVSLELEALRKLQSSLEINHDHEYTTTETVQEITDESMPLFLELDSTSF | 691 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g00608 | 691 | SUPERFAMILY | LysM domain | 208 | 244 | IPR036779 | - | |
Vimu6g00608 | 691 | ProSiteProfiles | LysM domain profile. | 208 | 255 | IPR018392 | - | |
Vimu6g00608 | 691 | Coils | Coil | 641 | 661 | - | - | |
Vimu6g00608 | 691 | ProSitePatterns | Protein kinases ATP-binding region signature. | 384 | 407 | IPR017441 | GO:0005524 | |
Vimu6g00608 | 691 | Gene3D | Transferase(Phosphotransferase) domain 1 | 454 | 676 | - | - | |
Vimu6g00608 | 691 | CDD | LysM | 209 | 243 | IPR018392 | - | |
Vimu6g00608 | 691 | Pfam | LysM domain | 94 | 128 | IPR018392 | - | |
Vimu6g00608 | 691 | Pfam | LysM domain | 210 | 241 | IPR018392 | - | |
Vimu6g00608 | 691 | SMART | LysM_2 | 89 | 128 | IPR018392 | - | |
Vimu6g00608 | 691 | SMART | LysM_2 | 143 | 189 | IPR018392 | - | |
Vimu6g00608 | 691 | SMART | LysM_2 | 209 | 259 | IPR018392 | - | |
Vimu6g00608 | 691 | Pfam | Protein kinase domain | 378 | 644 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00608 | 691 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 499 | 511 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu6g00608 | 691 | Gene3D | LysM domain | 196 | 268 | IPR036779 | - | |
Vimu6g00608 | 691 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 80 | 655 | IPR045274 | GO:0007166 | |
Vimu6g00608 | 691 | FunFam | Wall-associated receptor kinase 2 | 454 | 671 | - | - | |
Vimu6g00608 | 691 | SMART | serkin_6 | 378 | 651 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00608 | 691 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 453 | - | - | |
Vimu6g00608 | 691 | CDD | STKc_IRAK | 384 | 651 | - | - | |
Vimu6g00608 | 691 | ProSiteProfiles | Protein kinase domain profile. | 378 | 651 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g00608 | 691 | FunFam | Wall-associated receptor kinase 2 | 349 | 453 | - | - | |
Vimu6g00608 | 691 | SUPERFAMILY | Protein kinase-like (PK-like) | 362 | 648 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g00608 | Vimu-Chr6 | 7286969 | 7289249 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g00608 | 308 | 652 | Receptor kinase-like Gene Family | AT1G16130 | 58.501 | 5.41e-140 | 426 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vimu6g00608 | Pkinase | 4.8e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g00608 | - | - | vun:114186184 | 1273.84 |