Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00540 ATGCGTGAGGTTTCATCCCTTTCTTCTACTGAAGTGGAGGCCCGGAAAGACGAAAAGCGGAAGGGAAATCCCAGGAGATTGGAGAAATCTGAAGAACTAGGCAGTCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCTCTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGGAAGAGGAAGCCTTCTGAGAAAGCGATGGAACGGAAAGAAACTTTGGAAGAGGAGCTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTATTAGCCATCTTTCAGTGCCTTGTATCAGTTGCCGAAGATGAGGAAGAACCAAACAATGATGGATTTGGTGTTGAGGGTGGCAGTGCTGGACTGATGTCTGATGTTCTTTTGCAGCTGTCTAGTCTCTGCAATGCTAATTTTATATTCAAAGGTAGAAGCTGTCCAATTGAGGGCTCAACCCGGTACCGATCAACCATTTCCGAAGATCTGGCTTTGAAGGTGACATCAATCTCTCCCCTAACTTTCCCTCAAAATTCTTTGATATTGTTTATGTAA 603 0.4345 MREVSSLSSTEVEARKDEKRKGNPRRLEKSEELGSLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKAMERKETLEEELLMKGPGTFPLERLLAIFQCLVSVAEDEEEPNNDGFGVEGGSAGLMSDVLLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKVTSISPLTFPQNSLILFM 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00540 200 MobiDBLite consensus disorder prediction 9 34 - -
Vimu6g00540 200 MobiDBLite consensus disorder prediction 1 34 - -
Vimu6g00540 200 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 9 184 IPR020796 GO:0000808|GO:0005634|GO:0006260
Vimu6g00540 200 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 13 183 IPR047088 -
Vimu6g00540 200 MobiDBLite consensus disorder prediction 63 91 - -
Vimu6g00540 200 MobiDBLite consensus disorder prediction 69 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00540 16 192 Core DNA Replication Machinery Family AT4G29910 62.295 3.66e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00540 K02607 - gmx:100784340 320.857