Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00533 ATGGCAAAGAGGTCACAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCTCGATTTACTCGGAAGTTGATAGCAGATAAGAGGCATGGAAGCAAGCATGCTTTTGGTGCACCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGGTGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATCACTGACCAAGATGAAATAAAGGATCAAGGTAACGTGGAAGTGGAATCAAAGCAATCCAGATTAGTGCGTGATGAACCCCAGAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAAACGTGATTTAAAATCAGATGCAACCTTGAAATCAGAGTTTTCACATAAGAAGCATTCAAGGGAACAGTCAAAAGATACTATAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCTATGATGTTTGACAATGATGGCAAAATTGATGCGCAGTCAAACCAAAAGAGTGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGGAAAGATCTGCATGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTCATAAGTTCAGATAAGCAATTGTTCCTTAAACTTCTACAAGAGCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTTGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGCTTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGTAAGCATCTTAACTTTTTCAGGAAAAGGGGGAAGTCTCAATCAAAAGATCTGACAAATGAAAACGGAAAAACTGAGTTTTCAAATAGAATTGTTATTCTGAAACCTGCACTAACTGGCATTCAAATTTCTGAAAGTGAAAGCAACCTTGCCTCATTGCTAGATTCTGGTGATGTTGCCCATTACAAAGGTCCTTCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGAAAATTGAAACATGCCATGGGAAAGGAGAGGCATGGAAACCCTGAAGTAATCCCACGAAAGCTCCCTGTTGAACGTCAAAATAAGTTGCCAAGAGGCAACTGCAAAGATAATACTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAGATTGCAAGACCAATGTTTGATGTTATGAAGGGGAACAGGACTGATACACTGAAGGACTCTGAAATGATCGTAGAACAAGAAAGTGGTATTCCCAAGCTTAGTACTTCTAACTTATATGTTGAGGCAAGGAAACATCTATGTGAGATGCTAGATAATGGTGATGAAAACACAAACATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAGAATACTTTCTTTTCCCGAGTACAACTTTTCACCTGTAGAAAGTCCTGCAAGGGATTTTGAGCATCATTCTGTGACTGCACAGGCAATATCTTCTCCCTCTGGAAAAACTAGGGAAGTTAGTGAGGATATTTCCTCCCCAGAACCAGCAACCTCGGTTGGTTTTCCAGCTCAGGAAACTAACAATTCAGAAGAGAAGTCATGCGTTTGTGATGGAATCTCTAATAATAAAGTACAACAAATTAAGCCAGTGTCAAATTTCTCCAATGATGTTGGTCCTGTTGATACATCTGAAGTCTGTTGTCCTATTAGAGATGTGACAGTCACTGAAGACAATGTTGAACCTGCAGAAGAGAAAAATGGGTTGGAATCAGATCTGAATGGCTTCATCGTAGGACAGGACCAAAAAATTGATATCTCAGAAACTCCTGATGGTGCAAAATGTTCTGGATGTTTGAATCAGGATGAAGATATAACAGAAGAGAACCAACTATCATCTCTACCGATGTCTCCTCACTCTTTGATCTCTAAGAAAAATGGAGAGCTAGAATGTGGTATAGATTTATCTGGGGGACCGAGTCCCGTATCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGACACTCCAGATGTCAACCTGTTAACTTACCAGTACAACCTCTACAAATTCAATTTGAAGAACACGAATCTTCACCTGCAGAACAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATATATGACTACATCAAAGTTGTCTTGCATGGCTCTGGTTTGACAAGAGATCAGTTGTTGGTGAAATGCCTTACCTCTGACAAAATACTAGATCCTTCCCTCTTTGATCAAGTAGAGTTCTTCTCCAACTTGCTTTGCCACGACCAGAAGCTCCTATTTGACTCTATCAATGAGGTCCTGATGGAGGTTTGTCAGCATTATTTTGGGGTCTCACCTTGTGTTTCATTAGCAAATCCTTGCATGAGGCCAGCTCCAAGTATGAAAAGGCTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGGGGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGTCTTATTAGTGAAAGTTCAGTAAGTATTTAA 2760 0.3949 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAPLTKNKFEVLSNLGENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMITDQDEIKDQGNVEVESKQSRLVRDEPQKTDSKRKKKSRKKKRDLKSDATLKSEFSHKKHSREQSKDTIDLDKIMDDFCHVEAACSMMFDNDGKIDAQSNQKSVMSENLANAIHEFVNQMRLNGKDLHEDGQFLSSRELMEALQVISSDKQLFLKLLQEPNSHLLKYIQEFENAQGRDGKECSSLTASNCSELELVSLKQTRENTNRKHLNFFRKRGKSQSKDLTNENGKTEFSNRIVILKPALTGIQISESESNLASLLDSGDVAHYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKLPRGNCKDNTGMRSPNKDHFFIEKIARPMFDVMKGNRTDTLKDSEMIVEQESGIPKLSTSNLYVEARKHLCEMLDNGDENTNISSRQIPKTLGRILSFPEYNFSPVESPARDFEHHSVTAQAISSPSGKTREVSEDISSPEPATSVGFPAQETNNSEEKSCVCDGISNNKVQQIKPVSNFSNDVGPVDTSEVCCPIRDVTVTEDNVEPAEEKNGLESDLNGFIVGQDQKIDISETPDGAKCSGCLNQDEDITEENQLSSLPMSPHSLISKKNGELECGIDLSGGPSPVSVLDTSFSDDDSGHSRCQPVNLPVQPLQIQFEEHESSPAEQFDTGKYSFGENELIYDYIKVVLHGSGLTRDQLLVKCLTSDKILDPSLFDQVEFFSNLLCHDQKLLFDSINEVLMEVCQHYFGVSPCVSLANPCMRPAPSMKRLTFKVWEGVCWHVLPLPPPRTLEQIVRKDMARRGTWMDLELDAETIGFEMGEAILTELMEDTILSLISESSVSI 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00533 919 MobiDBLite consensus disorder prediction 107 132 - -
Vimu6g00533 919 Pfam Domain of unknown function (DUF4378) 759 906 IPR025486 -
Vimu6g00533 919 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
Vimu6g00533 919 MobiDBLite consensus disorder prediction 531 566 - -
Vimu6g00533 919 MobiDBLite consensus disorder prediction 107 167 - -
Vimu6g00533 919 MobiDBLite consensus disorder prediction 144 167 - -
Vimu6g00533 919 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 911 - -
Vimu6g00533 919 MobiDBLite consensus disorder prediction 532 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00533 Vimu-Chr6 6497235 6504892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00533 1 894 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 30.752 2.91e-93 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00533 - - gmx:100783243 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00533 6 6497235 6504892 Vimu6g00533 6 6497235 6504892 ECH
Vimu6g00533 6 6497235 6504892 Vimu9g00301 9 3654775 3658645 PCT