Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00456 ATGGAGAACAGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGACGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTACGGTCAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTACGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTGAAGTAAAAACCCTTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGGGTTGTGAGGACTGTTATGGTAGATCACAGTCATGATCTTTGTCCACAAACTTCCAATCTCATTCGTGCCAACAGAAAATTGGAC 426 0.3779 MENSAENITMNGESNDEFINVVDSVSDLVPTVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPEVKTLPSQTKQCPAGITFAKKDDKWVVRTVMVDHSHDLCPQTSNLIRANRKLD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00456 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 140 - -
Vimu6g00456 142 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00456 Vimu-Chr6 5365739 5366609 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu6g00456 FAR1 1.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00456 - - vra:106766675 228.794