Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00442 ATGGCCAGAAAAAACGAGGGATGTGCAGTGGGGATAGACCTCGGAACAACGTACTCGTGTGTTGCAGTATGGCAGGAGCAGCAGGGGCGAGTTGAGATCATCCACAATGACCAAGGCAACAACATCACTCCTTCTTTTGTTACTTTCACTGACAAACAAAGATTGATAGGTGATACTGCTAAAAACCAGGCTGCCACCAATCCAGAGAACACTGTGTTTGATGCTAAAAGATTAATTGGTCGGAAAAAAATTTTCATCAATTCTTCATCGTTTCTAGTTGCTTCGGCTACTGATTGTAGCCATGTATTTCGAGGTTCTGACCAAGCCATTGCGAAGGTCCTAGATAAAGCATCAGCAGGGGTATTCTCCTTTCCTGGTGAATATTGTATTGTGAAATCAAACCCTATAAATTTGGGTAGCCATTGTTGTTGCTTAGGGGTTTGGAGTGTCTGCTCCAATAATTCTTTTAAACTCTTCTGA 480 0.425 MARKNEGCAVGIDLGTTYSCVAVWQEQQGRVEIIHNDQGNNITPSFVTFTDKQRLIGDTAKNQAATNPENTVFDAKRLIGRKKIFINSSSFLVASATDCSHVFRGSDQAIAKVLDKASAGVFSFPGEYCIVKSNPINLGSHCCCLGVWSVCSNNSFKLF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00442 159 Pfam Hsp70 protein 9 82 IPR013126 GO:0005524|GO:0140662
Vimu6g00442 159 SUPERFAMILY Actin-like ATPase domain 8 83 IPR043129 -
Vimu6g00442 159 PANTHER HEAT SHOCK PROTEIN 70KDA 9 82 IPR013126 GO:0005524|GO:0140662
Vimu6g00442 159 Gene3D - 1 124 - -
Vimu6g00442 159 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vimu6g00442 159 FunFam heat shock 70 kDa protein-like 3 121 - -
Vimu6g00442 159 PRINTS 70kDa heat shock protein signature 60 68 - -
Vimu6g00442 159 PRINTS 70kDa heat shock protein signature 38 50 - -
Vimu6g00442 159 PRINTS 70kDa heat shock protein signature 8 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00442 Vimu-Chr6 5190301 5192663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00442 1 82 Calmodulin-binding Proteins AT3G12580 74.390 9.84e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00442 K03283 - vvo:131625172 146.362