Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00419 ATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTTTGAAAAAGATGTTTCTGATGGTTTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCCGCATGTAGAGCAATGTTTGAAGAAGGAGATGTGGATGACAGGTACCTCGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTGAGAGGAACAACATTATATCGTGCGACTGAGTTGCAGAAGAAAAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGGAACTTTTGACTCTTGATGGAAATTCAGAGATGTATGGTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGACCCGTGCTTTAAACATTCCAATGCCTCGATCCTATGTATTTCCAGAAATGCAAGATGATCATGGCAGTTGCATTCCTGAAGCTGATGAAAAAAGAGAAACTGTTTGGGTGGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTAAAGCCGATAGCAACGTGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTATTTTGGCTGCTCAAAGTGACTTGCAAAATGACCAAGAAATTTCTATTAGTTATGGAAACAAGGGAAATGAGATTGAGGTATTTGATTCACCTCTACTTGTTCCCCTGCAAATTGAGGTCCACTATCCAGCAGAAGCTATGAATACTATTTCCCTTTCAGAGTCCAAAGGACAGCTTCTCGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACACAAAACGTTTCTGGATAATGGGTTTTTTCCGCTAGGGACCCAAATCAGTGGAGAAGATAACAAGGGAAAAGCTGAACAAGTTTGCAACTATAGTTGGAGCGGTCAGCGCAAGATGCCATCTTATGCAAACAAGCTAGTCTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGATTGTTGTTGTGGTTTGTGTTGAAGTGGGGATTTTTGGGTTTCAGATTCTTGCGTTTTGGGTTCTCGAGGTGGTTGCGATGGCAGCGGCAACTTGTTTTGCTTCGAGTGGTGCAACCATAGAGGTTGCGGCGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTCTGTGGTGATACTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGAATCTTGAAGAGAGTTCTGGAACAGATGAAGATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATGACCAGGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGACAAATGACTCTGAGGAGCCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATCGGCGTGGACAGAAACAGCTAACAAGGTTATTCCTGCAAGAAGCAGAACATGCTTTGCAGTTATCATTGAATGAAGAAGAGGTGACTTCTTGCTAA 1647 0.422 MQWLQANGVELRGCKIKWCDSKRGFGIFFEKDVSDGFMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDIVKELLTLDGNSEMYGEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHGSCIPEADEKRETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILAAQSDLQNDQEISISYGNKGNEIEVFDSPLLVPLQIEVHYPAEAMNTISLSESKGQLLEVQNAEMRCLLHKTFLDNGFFPLGTQISGEDNKGKAEQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEEIVVVVCVEVGIFGFQILAFWVLEVVAMAAATCFASSGATIEVAALAGPERERELSDTDVQSAVWEVCGDTGALQLLVDLLRVKMMNLEESSGTDEDDLDLLRKALIIDDQEDSKQCTSNLSTKTNDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLQEAEHALQLSLNEEEVTSC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00419 548 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 1 487 - -
Vimu6g00419 548 CDD SET_LSMT 20 252 - -
Vimu6g00419 548 SUPERFAMILY SET domain 2 252 IPR046341 -
Vimu6g00419 548 Gene3D set domain protein methyltransferase, domain 1 1 255 - -
Vimu6g00419 548 Pfam SET domain 57 247 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vimu6g00419 SET 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00419 - - vun:114183365 879.396