LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g00384	AAGTTGCCTAATGGCTCAGAAGAGCAAGTCAAATTGGAAGAATCTGTCTTTTTGCCATCCATGACAACAAGGTCATTTCTTGTTGGTGATGGAAACCAAGTGATCAGAAGAGCAAATGATGTTGATTCTTTCAGTGGAATAACCGGAAGTGAAGAATATAGGTTGCATAGAGAAGGCAACAAGGTGAAGGATAAAAGTGTATTATTCGGAGTTCCTTCCTTTTCCAATATTGGATCTTCTAATGATGCCAAGAAGATGAAGGTTAATGTTGGCAATAGACGAAGTATGAGATTGTGCCCTACTAGCAATGTGTTAAGTGGAAAGCACATCCATACTCAACTTGAGAGCATTGGAAGTGTCTCCCAATTGCCCGGCAGCTGTGATCAAAGGTGTTCCTTTCCATTCAACTGTTTAAGCTTTATCAAACATTCAATTGCTTTGACTAGAAGTGGAAACTGGGTAAAGGCTCGGAAATGGGCTGCAGTTCCTGGTAGCCAAGCCACCTACCTTGGCAACCCAGTTCCATGGGGCACACTACCCACCATTTTGGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGACCATGGAGAAAGACCCAGAGAAGAAGAAATACCTTGGTGGTGCTTTTGATCCTTTGGGATAG	654	0.4266	KLPNGSEEQVKLEESVFLPSMTTRSFLVGDGNQVIRRANDVDSFSGITGSEEYRLHREGNKVKDKSVLFGVPSFSNIGSSNDAKKMKVNVGNRRSMRLCPTSNVLSGKHIHTQLESIGSVSQLPGSCDQRCSFPFNCLSFIKHSIALTRSGNWVKARKWAAVPGSQATYLGNPVPWGTLPTILVIEFLAISFVEHQRTMEKDPEKKKYLGGAFDPLG	217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu6g00384	217	Gene3D	Chlorophyll a/b binding protein domain	137	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g00384	Vimu-Chr6	4703072	4704500	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu6g00384	151	217	Chloroplast and Mitochondria Gene Families	AT3G54890	88.060	2.42e-39	133

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g00384	K08907		-	var:108327240	219.55