Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00337 GTCGTGGTTCATTCGCTCGTGCTTCTTAGCATCATCGACAACTACAATAGAATCACTAAGGACACGTGCAAGCGCGTCGTCGGCGTTTTACTCGGCTCATCTTTCAAAGGCACCGTCGACGGTACCAACAGCTACGCCGCCGCCACCACTCCCATTACATCCCCAGTCACCACCCCTTCTAAGCCTAAATCACCGGTGCCGATTGCTTCTCCCAAATCATCTTTGCCATCTTCCTCCCCCAATGTTGCAACCGCAACCCCCGCATCATCTCCCACTACTTCGCCTGCATCTAAAACCGCTACGCCAGCTCTAGCGACCAACCCCCCGGCCGCCACACCACCAATTGCTAGAACTCCTGCAGCCACACCCCCGGTTACTACACCTCCTATAGCCACACCCTTGGTTGCTACACCTCCTGCAACCACACCCCTGGTTGCTACACCTCTTGCAGCCACACCTCCAGCAACCACACCTCCTGTAGCCACACCTCCACTAGCCGTGGTGAGAGAACTTGTCGTGGGAAGAGAGAAGTTTGGCGTATTTGAGAAGGCTGTCGTGGTGTTCGACTTTGGGATCGATGGTGAAGACAGCGGGGAGAATGAAAGGGAGCTTCTCTGCGCTCATGGCTTGAACCTCAAAAGTGTAGTTCATAGGAGAGAGGCGAAGAAGGTGAAGCAGCTACTTAAGGGGCGTCTGTCCAGGGAGCGACAGATATACGAGATGAGGAAGCGGGCAGAGCTGAAGGCGGCAGTGTCGAAGCAACCATGGGAGGTGGTGGATACGGCGGCGACGACACCTTATCTGTTCTGCAGAAAAATATTTGATGTTTTGGTTAAAAAAGCAACATAA 849 0.5383 VVVHSLVLLSIIDNYNRITKDTCKRVVGVLLGSSFKGTVDGTNSYAAATTPITSPVTTPSKPKSPVPIASPKSSLPSSSPNVATATPASSPTTSPASKTATPALATNPPAATPPIARTPAATPPVTTPPIATPLVATPPATTPLVATPLAATPPATTPPVATPPLAVVRELVVGREKFGVFEKAVVVFDFGIDGEDSGENERELLCAHGLNLKSVVHRREAKKVKQLLKGRLSRERQIYEMRKRAELKAAVSKQPWEVVDTAATTPYLFCRKIFDVLVKKAT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00337 282 MobiDBLite consensus disorder prediction 40 57 - -
Vimu6g00337 282 Gene3D Cytidine Deaminase, domain 2 1 65 - -
Vimu6g00337 282 PANTHER OS02G0564300 PROTEIN 218 264 - -
Vimu6g00337 282 MobiDBLite consensus disorder prediction 107 136 - -
Vimu6g00337 282 MobiDBLite consensus disorder prediction 40 139 - -
Vimu6g00337 282 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 1 47 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vimu6g00337 282 MobiDBLite consensus disorder prediction 70 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00337 Vimu-Chr6 4191147 4197325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00337 213 257 Inorganic Solute Cotransporters AT2G37920 70.213 1.37e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00337 K03038 - vra:106752984 111.309