Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00311 ATGGTGGATGCCAGGAAGAAGATGGCGAAGCTGGACGTTGAGCGGAGGGTGGAAGAGAGGAACTTGTTCAATGTGAAGCGCGTAAGGTATTATAGGCACATGGTCGAGAGGGAGCTGTCTAATACTTACAGTGCTATTAGGATAATTTTAGAGGAGCATCTTATCCCATCAACAAATATCGCGGGGTCCACCATGTTTTATTATAAGATGAAAGGAAACTATTACAAGTTCTTGGCAGAATTCAAAGCTGGTAATAAAAATACGGAGGTAACAGAGCAGTCACTTAAAGCATATTACAGAGCTGCTACCACTGTTGAGAGGGAATTACAACCTACGTATTCTATTCGTTTGGGAGATGACTATGATATAGTAAGGAGATCAAGTGACAACTATTTGTTTTTTTCTGATGAAGTAACTTGCCAAGAGCACCCAGATACTGTTGGGGGAGCGATGATGAATGGATTACGAGAGTCTTTTCGCATAATTGACACTTTGAGCATGAGCACGGGAAATGATTATATTGCATTGGTGGAGAATTTGAGGACACATTGTCCTGAGGGAGAGGGTTAG 570 0.4193 MVDARKKMAKLDVERRVEERNLFNVKRVRYYRHMVERELSNTYSAIRIILEEHLIPSTNIAGSTMFYYKMKGNYYKFLAEFKAGNKNTEVTEQSLKAYYRAATTVERELQPTYSIRLGDDYDIVRRSSDNYLFFSDEVTCQEHPDTVGGAMMNGLRESFRIIDTLSMSTGNDYIALVENLRTHCPEGEG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00311 189 PANTHER 14-3-3 PROTEIN 24 118 IPR000308 -
Vimu6g00311 189 Pfam Flavin containing amine oxidoreductase 117 162 IPR002937 GO:0016491
Vimu6g00311 189 PRINTS 14-3-3 protein zeta signature 62 84 IPR000308 -
Vimu6g00311 189 PRINTS 14-3-3 protein zeta signature 97 123 IPR000308 -
Vimu6g00311 189 PRINTS 14-3-3 protein zeta signature 31 55 IPR000308 -
Vimu6g00311 189 Coils Coil 1 21 - -
Vimu6g00311 189 Gene3D - 14 121 IPR036815 -
Vimu6g00311 189 SMART 1433_4 1 176 IPR023410 -
Vimu6g00311 189 SUPERFAMILY 14-3-3 protein 1 118 IPR036815 -
Vimu6g00311 189 Pfam 14-3-3 protein 5 118 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00311 Vimu-Chr6 3760460 3762332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00311 1 118 14-3-3 family AT2G42590 43.333 1.93e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00311 K06630 - vra:106773391 169.088