Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00309 ATGGCGCCACCTATCGCGGCGCAACTTGCGGTCTTCGCCCTGTTCGTCACCGCCGTCTCCGCTGCCACAACTGGGTACCACAACCACACCGTTGGCGGCGCCGCCGGGTGGTCCTTCAACTCCACTACCAATACAACAGCCGCTAACTACACTTCCTGGGCTTCGAATCAAACCTTCGACCTTGGCGATTATCTCATTTTCAATACGAACTCCAACCAAACGGTGGTTCAGACTTACAACAAGACGACCTATCTGAACTGCACCGCTGACGATACCGACAATGGTACCTTCGTGTACGACAGCGGTAGCAGTGGTTTCGGCGAATCGTTGACCATCGCCGTGCCGTTGACAATAGTTGGACCAAACTACTTTTTCTCCGACTCCAGCGATGGCGTGCAGTGCCAGCACGGCTTGGCCTTCGAAATCGACGTCCAGCACGGCGCCGGCTTGCCACCGAACCTCAACCAGCCGCCTCCGCCGCCGTACCAGGAGCCTCCCGGTCCCGACGCCGCTCAGTCTCCACCATTTACGGTAGCGCAGTCTCCCACTGGCGGCGCGTTCGGGGGCCGCGCTGACATGCGCTTCACGGTTTATGTTTTGGGTGCGGCGTTGCTGCTGCTGCCGCTGTTTCAGTGA 636 0.5912 MAPPIAAQLAVFALFVTAVSAATTGYHNHTVGGAAGWSFNSTTNTTAANYTSWASNQTFDLGDYLIFNTNSNQTVVQTYNKTTYLNCTADDTDNGTFVYDSGSSGFGESLTIAVPLTIVGPNYFFSDSSDGVQCQHGLAFEIDVQHGAGLPPNLNQPPPPPYQEPPGPDAAQSPPFTVAQSPTGGAFGGRADMRFTVYVLGAALLLLPLFQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00309 211 ProSiteProfiles Phytocyanin domain profile. 27 146 IPR003245 GO:0009055
Vimu6g00309 211 FunFam Early nodulin-like protein 18 26 147 - -
Vimu6g00309 211 SUPERFAMILY Cupredoxins 27 145 IPR008972 -
Vimu6g00309 211 MobiDBLite consensus disorder prediction 152 172 - -
Vimu6g00309 211 Pfam Plastocyanin-like domain 44 137 IPR003245 GO:0009055
Vimu6g00309 211 MobiDBLite consensus disorder prediction 147 183 - -
Vimu6g00309 211 Gene3D - 26 147 IPR008972 -
Vimu6g00309 211 PANTHER BLUE COPPER PROTEIN 23 152 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00309 Vimu-Chr6 3740153 3741029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00309 1 151 Phytocyanin Superfamily AT1G08500 40.000 4.60e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00309 - - gmx:100783106 306.219