Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00247 ATGCTGTCGTTTCGGCCTGCTGATTTGAAGAACAATTTTCTTGAGCCACTGGAATGCTCAATTGAAAGGGCAATTGCTAAAATTGGGTCGTTGCCTATAATGGCAACTGCAGGGGTCTTCGTGGCACACACCTCATTTGGAAAAATGAAGGAAGCTTTTGTGCATTTCAAGAAAAACAAAGAAACCCAAAAGCTAGGGCTTGGGGCGAAGCAAAGAAGAAGAGGGAGATTAAACTGTGATCGTCCGATGGAGAGAGCAAAACGTCCAAGTGAAGCAAGGGCGGGGAGTGATCGCCGGTGCAAGAGGCATGGTGCAGGGGGCACGGACAAGGAGCGGCTCCTGGCAGGCTTCCAGTGGAAGGGGCACATGGACGAATCGAACATACACCAGAATGAGAGAGATCTGGAGACTCCTGGAGAAATTCTGGGATGGGTGACCTTTCGGGAAGTTTTCCCGGAAAGTGTGCGACTGAGGACAAAGCACACTGGAAAGTCTCGTGGTGATGTGTGGGGGCAGTCAACAGTCCCTATTGAATTGGACTCTGTCACTCTGCATTTTATGATTCTTCTGGAATCAAATGACTCCACATGGTGGTTTTTGGTCATTGTTACTGCTGATTCTACTGTGGATTCCTTAAAGGTGCAAGTGGAACTCTGTACTGAGGACTGCATCAACCTCTGGCTCTGCTCTCACAAAACCTGCCCTGTTTGTCACCGAGACCTTAACTCTCCCCCAGACGACCAACCTCTCAAACTCGGCGACGTCGTTGTTTCCTCAATCAGCGGCGAGATATGCGTTGATGTGAGAGAAGAAGAAGGCCTTGATTGTGGTCGTGAACATGAACATGAGGTGGTTGATGCACACGAGGAACAAATGTTTGTACGGTCTCATTCCACCGGGCACTCCATAGTTATGATTAGAGAGGAGGGGGATGATGAGGGAAAGAATGATGATGACAAGTACACATTGAGATTTCCAGAGCATGTTTTGATAGTGAACAGTAAACATAATTCTACGAGGAGCTGTGCGAGTTTTAAGGATATGACCTAG 1050 0.48 MLSFRPADLKNNFLEPLECSIERAIAKIGSLPIMATAGVFVAHTSFGKMKEAFVHFKKNKETQKLGLGAKQRRRGRLNCDRPMERAKRPSEARAGSDRRCKRHGAGGTDKERLLAGFQWKGHMDESNIHQNERDLETPGEILGWVTFREVFPESVRLRTKHTGKSRGDVWGQSTVPIELDSVTLHFMILLESNDSTWWFLVIVTADSTVDSLKVQVELCTEDCINLWLCSHKTCPVCHRDLNSPPDDQPLKLGDVVVSSISGEICVDVREEEGLDCGREHEHEVVDAHEEQMFVRSHSTGHSIVMIREEGDDEGKNDDDKYTLRFPEHVLIVNSKHNSTRSCASFKDMT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00247 349 MobiDBLite consensus disorder prediction 67 107 - -
Vimu6g00247 349 SUPERFAMILY RING/U-box 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00247 Vimu-Chr6 3029385 3034676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00247 210 329 C3H Transcription Factor Family AT2G34990 29.600 3.79e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00247 - - vum:124822565 227.639