Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02860 ATGGCTCATTTACTGGCGAGTAATCCCAGCCCTTCACATAAAATTGTGTGCTCAAACTTGGGGTACGGTGCTGGAAGAGGATCCAGAAGTGATTCTAGCAGAGTGGGAAGGAAAAGGCGAGGAGGTGGTTTGGTGTTGCAATGCAGCAGCAACACAAGCACAAGCACCAGCAGTTCGCAATTGCCTTGTGTTGATCAGGATGTGAGGTTGCTGATAGAGAATGGTAGCAGTGGAAAGCTGAAGCAGCAGTTTGAGTATTTGGCGTGTGAATATGGATGGAGAGTAAGGAGGCTATTTGAAAACGCAGATGAGATAAGGAAGGCATCTGAGGTTCAGGCCGAAGCATTTCATGCTCCTGTCTCTATTTTCAACGACGTGTTCCTTCAATTCTTTCAGGTAACACAAATTAATGAGGGGTGTAGGCATAAAAGGTATGCTTGTTTGGTAGCTGAGCCAGCAAAAGATGGTCCAGATTCAGCAAAACAACTTGTGGGTGTCATAGATGTGACTGTCTTAAGAGACCGAAATGTGCTTCAACATCTTCCACCTGAAGCTGAAGAGTACCTCTACATATCAGGAATAGCCGTCTCCAAAATATTCAGGAGGAGGAAAATAGCGACTGCACTATTGAAAGCCTGTGACATGCTTTCTATTTTGTGGGGTTTTGAGTTTCTTGCCCTTCGAGCCTATGAAGAAGATCTAGGTGCTCGCAAATTGTACACAAATGCTGGGTACCAAGTCGTGTCTCGAGATCCACCGTGGACAAGTAATTGGATTGGAAAGAAATGTCGTGTTCTTATGATCAAAAGAACTAGTTTGCCTAAGTAG 828 0.4469 MAHLLASNPSPSHKIVCSNLGYGAGRGSRSDSSRVGRKRRGGGLVLQCSSNTSTSTSSSQLPCVDQDVRLLIENGSSGKLKQQFEYLACEYGWRVRRLFENADEIRKASEVQAEAFHAPVSIFNDVFLQFFQVTQINEGCRHKRYACLVAEPAKDGPDSAKQLVGVIDVTVLRDRNVLQHLPPEAEEYLYISGIAVSKIFRRRKIATALLKACDMLSILWGFEFLALRAYEEDLGARKLYTNAGYQVVSRDPPWTSNWIGKKCRVLMIKRTSLPK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02860 275 PANTHER N-ALPHA-ACETYLTRANSFERASE 100 272 - -
Vimu5g02860 275 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 121 256 IPR016181 -
Vimu5g02860 275 Pfam Acetyltransferase (GNAT) family 148 245 IPR000182 GO:0016747
Vimu5g02860 275 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 103 272 IPR000182 GO:0016747
Vimu5g02860 275 CDD NAT_SF 147 227 - -
Vimu5g02860 275 Gene3D - 100 270 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu5g02860 Acetyltransf_1 8.3e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02860 - - gmx:100808330 394.045