Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g02853 | ATGGCCCAGCAGTCATCTAGGCTCCAGCGTTTGCTTACTCTCCTGGACACTGGGTCAACCCAAGCTACAAGGTTGACCGCTGCTCGTCAGATAGGGGACATTGCAAAATCACACCCTCAAGACTTGACCAGTCTTCTCAAGAAGGTTTCTCAATATCTCCGCAGTAAAAATTGGGATACACGAGTTGCAGCTGCTCATGCAATTGGATCAATTGCTGAGAATGTTAAGCACATAAGTTTGACTGAACTTTTCGCTTCTGTTTTATCAAAAATGAGTGAGAATGGGATATCTTGTAGCATTGAGGACCTGTGTGCATGGCCATATTTACAATCAAAAATTACAGGAAGTGCATTCAGAAGCTTTGATATGAACAAGGTGCTTGAATTTGGTGCCTTACTTGCATCAGGGGGCCAGGAATATGATATTGGAAATGATAGTATAAAGAACCCAAAGGAGCGATTGGTTCGACAGAAGCAAAATCTTCGACGTCGTTTAGGTTTGGATGTCTGTGAACAATTTATGGATATCAGTGATGTAATAAGAGACGAGGATCTTATGGTGTCCAAATCAGACCCACATCTGAATGGGATTGATCGTAGAGTTTTTACTTCTTGTTCTGCACATAACATCCAGAAAATGGTTGCAAACATGGTTCCTAGTGTCAAATCAAAGTGGCCAAGTGCAAGAGAGTTGAATCTTTTAAAGCGTAAAGCAAAAATAAACTCAAAGGACCAGACAAAAGGCTGGTGTGAAGATGGAGGTACAGAGGCATCAGGTGCTCAAAGTTTGACTCCAAAAGGCACATGTCCTGATTCACTGAATTACAGTAAGGTATTCATGGATGTTAATCATGACGATGATGGCTTTGAACATGATGGGGATGGGCAATGGCCTTTCCACACTTTTGTTGAGCAACTTATTATAGATATGTTTGATCCTGTTTGGGAGGTACGACATGGTAGTGTGATGGCACTGAGAGAAATTTTAGCACATCAAGGTGCTTCTGCTGGCGTATTTAAACCTGACTCACACTTGGGTGGGACCTTGTTTATTGAATTAGAAGACAAAAGTATACCAACCACATTGAAGAGAGAGAGGGAAATTGATTTAAATATGCAAGTTTCAGCTGATGAGTTTGATTCAAACTTGAAGAGGCCAAAACTTGAAGATGTGTCATCACCAACCTTTATGGATAGTGTAATGACTTGCAACAATATTACTTCTGAAACCCTTGGATGCAATTTAACTTTGGATTACGAGAATGGGCAATTTAATGGTAATTCCAATGACATGGATCTGGAGTCTCACTCTGATGGCTCACGTGATGCATGCAAAGAGTCTGCCAGTATAACAGAACAGAAAGGTCATCTTGATGACAATCAGATGCCCTCCGGAAATCTTATTGCGCTGAGAAATCTTCCTCAGAACTGTGAGCTGATGAACTCTGTTAAAGTGGCTAGAAGTTCCTGGCTTCAAAACTGTGAATTTCTTCAAGATTGTGTGATACGGTTTTTGTGTGTGTTGTCACTTGATCGCTTTGGAGATTATGTATCCGATCAGGTTGTTGCTCCCGTGCGTGAAACCTGTGCACAGGCCTTAGGTGCTGCATTTAAGTATATGCATCCCGCACTAGTAAACGAAACATTGAACATATTGTTGAGAATGCAGTGTAGGCCAGAATGGGAGATTCGTCATGGCAGTCTTCTTGGTATAAAATATCTGGTTGCTGTGCGGCAGGAGATGCTGTCTGATTTGCTCGGAGGAGTTCTTCCTGCCTGTAAATCTGGTTTGGAGGACCCAGATGATGATGTCCGGGCAGTTGCTGCTGATGCTTTAATACCTGCTGCATCTGCAATTGTTTCCTTGCAGGATCAAACATTGCATTCAATTGTGATGCTTTTATGGGATATATTGCTTGATTTGGATGATTTAAGTCCGTCCACCAGCAGTGTAATGAATCTACTGGCAGAAATCTATTCTCAAGAAGATATGTCGCCAAATATGTATGAAGTTTTGAGATTGGGAGACAAGGAAATGGAAAATGAAGGTGGTGGTGGTGGTGGTGATTGTGATGGAGAAGAAAATCCTTATGTGCTTTCAACATTGGCACAACGTTTGTGGCCCTTTATGAGGCATAGTATAACATCTGTTCGCTACTCTGCAATACGGACTTTGGAGAGGCTACTTGAAGCTGGATATAAAAGAAGCATGTCTGAGTTGTCTGGTGCTTCATTCTGGCCCTCTTCTATATTTGGAGATACCCTTAGAATCGTATTCCAGAATCTGCTATTGGAAACAAATGAAGATATTTTGCAATGTTCTGAGAGAGTTTGGAGTCTCCTTGTTCAGTGTTCTATGGAGGACTTGGAGATGGCTGCAAGTTCTTACGGGGCTTCTTGGATTGAACTTGCATCTACACCATTTGGATCAGCATTAGATGCCTCAAAGATGTACTGGCCTGTTGCTTTTCCACGAAAAAGTCAAATTAGAGCAGCTGCTAAAATGAGAGCTGCAAAAATTGAAAATGAATTTGGTATGGAATTTAGTCTTGATTCTATTAAAGGATCTATTCCACAAGATAGAAATGGAGATGTTCCTATGAATTCTGTTAAGATAGTTGTCGGTGCTGATGTGGACACATCTGTTACTCATACCCGAGTAGTTACAGCAACTGCTTTGGGATATTTTGCTTCTAAGCTGCCAGTGGGTTCTTTAAAATATGTGATTGATCCACTATGGAGCTCTCTAACCTCTTTCTCTGGTGTCCAACGCCAGGTTGCATCTATGGTACTTATTTCTTGGTTCAAGGAGATTAAGCTCAATAATTCGTCCAAAAACCTTGATGGTATCCCTGGTGCCCTCAAAGGTTGGTTGCTGGACTTATTAGCATGTTCTGACCCAGCATTCCCAACAAAAGATTCACTTCTTCCTTATGCTGAGCTTTCCAGAACTTATGCAAAGATGCGCAGTGAGGCTGGTCAGTTACTAAATGTAGTCAAGTCTTCTGGTATGTTTGATGAGTTATTGACAGCAACACAAATTGAGTTGGACCGCTTGAGTGTGGATGACGCTATTGGTTTTGCTTCAAAAATTCCAGCTTTGTGTAATGATAGTTCTGCAAATGAGTTCTTGGCAAAGAACATCATGGATGATATTGAATCCTCCAAACAGAGACTCTTGACAACTTCTGGATATTTAAAATGCGTTCAGAGCAACTTGCATGTTACAGTCACGTCTGCAGTTGCAGCTGCCGTTGTCTGGATGTCTGAATTTCCTACACGACTTACACCAATCATTTTACCTTTGATGGCTTCTATCAGACGAGAGCAGGAGGAAATACTCCAAATGAAGTCTGCTGAAGCCCTTGCTGAGCTAATGTATCACTGTGTTGCACGTAAACCTTGCCCTAATGATAAATTAATTAAGAATATATGTAGTTTAACTTGCATGGATCCCTCTGAGACCCCTCAAGCCAAATCCCTTTGTACCATTGAGAGTATTGATGATCAGGGTCTTCTGTCTTTTAGAACTCCTGTTAGCAAACAGAAGTCAAAGGTCCATGTGCTAGCTGGTGAAGATCGTTCCAAGGTGGAGGGATTTTTAAGTAGACGAGGATCTGAGCTATCATTGAGGCTTCTATGTGAAAAGTTTGGTGCGTCATTATTTGATAAGCTTCCTAAGCTGTGGGATTGCCTTACTGAAGTTCTTAAACCTATAGAGGACACCGAGGAAAAGCAAGTTACTGTGTCTATTGAGTCTGTTAGTGATCCTCAGACCTTGATTAACAATATCCAGGTGGTGCGCTCTGTTGCTCCCGTGTTAAATGAGGAGTTGAAGCCAAAACTTTTGACGCTTCTCCCATGCATCTTCAAATGTGTTCAGCATTCTCATGTTGCTGTTAGATTAGCTGCTTCACGCTGCATCACTTCTCTGGCACAGTCAATGACTGTGAAAGTTATGGGAGCCGTGGTTGAAAATGCTATCCCAATGTTGGAAGATTCATCATCTGTTTATGCTCGACAAGGAGCAGGCATGTTGATTAGTTTTCTAGTTCAGGGGTTGGGTGTAGAGTTGGTCCCTTATGCTCCTCTATTGGTGGTTCCACTTCTGAGGTGTATGAGTGATTGTGATCAGTCTGTCAGACAGAGTGTGACCCATAGTTTTGCTGCTCTTGTTCCTTTACTTCCTTTGGCTCGAGGCCTTCCTCAACCAATTGGACTCGGGGAAGGTGTATCTAGAAATGCAGAAGATTTGCAGTTTTTAGAGCAATTGCTTGACAACTCTCATATTGAAGATTACAAGTTGTGCACTGAATTGAAAGTAACATTGAGGAGGTATCAGCAGGAAGGCATAAATTGGTTAGCTTTCCTGAAACGTTTCAAGCTCCATGGAATCTTATGTGATGACATGGGACTTGGAAAGACACTTCAAGCATCTGCAATTGTGGCCTCTGATATAGCTGAGCATCGCAGTACAATCGGGAATGAGGATCTTCTGGCATCTTTAATTATCTGCCCATCAACTCTAGTTGGGCACTGGGCCTTTGAGATAGAGAAGTATATTGATGTTTCTGTTATATCTAGTCTTCAATACGTTGGTTCTGCTCAGGAACGAATACTTCTTCGAGATCAGTTCTGTAAGCATAATGTCATTATAACATCATATGATGTTGTGCGTAAAGATGTTGATTTTCTGGGACAGCTACTCTGGAATTACTGCATTTTAGATGAAGGGCATATAATAAAAAATGCCAAGTCTAAAGTTACACTTGCTGTAAAACAGTTGAAAGCCCAACACCGCTTGATATTGAGTGGGACACCTATACAGAATAACATAATGGACTTGTGGTCCCTCTTCGATTTTCTGATGCCAGGCTTTCTCGGAACTGAGAGACAGTTCCAAGCTGCATATGGAAAACCACTTTTAGCTGCAAGAGATCCAAAATGCTCTGCTAAGGATGCTGAAGCAGGAGTGCTGGCTATGGAGGCATTGCATAAGCAGGTAATGCCTTTCCTCCTTCGTAGAACAAAGGATGAAGTCTTGTCTGATCTGCCAGAGAAAATAATTCAAGACAGATACTGTGATTTGAGCCCTGTACAATATAAACTTTACGAGCAGTTTTCTGGTTCTCGTGTAAAACAAGAAATGTCATCTATTGTAACGACGAATGAGTCTGCTGCACCAGAAGGAAGTGGCACTTCTACTAAAGCGTCTTCACATGTCTTCCAGGCAATTATATTTCTTCAATTATTAGCACTCCAATATTTGCTAAAACTCTGTAGTCATCCATTGCTTGTCACTGGTGAGAAGATTCCAGATTCACTTTCTCCCATCCTCTTAGAACTGTTTCCTGCTGGCTCTGATATTGTTTCAGAACTTCACAAACTCCATCACTCCCCGAAATTAGTTGCTCTTCATGAGATTCTAGAAGAATGTGGAATTGGAGTTGATAATTCAGGTTCTGAGGGTGCAGTTAACGTTGGGCAGCATAGGGTCTTGATATTTGCTCAACATAAGGCTTTCCTGGATATAATTGAAAGAGATTTGTTTCAGACACACATGAAAAGTGTCACATATTTGCGGTTGGATGGATCAGTTGCATCGGAAAAGCGATTTGAAATTGTCAAAGCTTTCAATTCAGACCCTACCATTGATGTTTTACTGCTTACAACACATGTCGGTGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTTGTTTTTGTGGAGCATGACTGGAATCCAATGCGTGATCATCAGGCTATGGATAGAGCACACAGGTTAGGTCAGAAAAAAGTAGTCAATGTCCATCGGCTAATAATGCGTGGTACTTTGGAAGAGAAAGTTATGAGTCTACAAAGATTCAAAGTGTCAGTGGCTAATGCTGTTATTAATGCTGAAAATGCTAGTATGAAAACAATGAATACAGATCAGTTGCTTGATTTATTTGCATCGGCAGAAACCTCCAAAAAGGGTGCTAATGCTGTAAAGAGTTCAGAGAACAATTCTGATGGAGACGCTAAATTAGTAGGCAGTGGGAAGAGATTGAAATCGATACTTGGCGGGTTGGAGGAGCTATGGGATCAATCACAATATACAGAGGAGTACAATCTGAGTCAATTTTTAGCGAGGCTTAATGGCTAA | 6144 | 0.4146 | MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLTSLLKKVSQYLRSKNWDTRVAAAHAIGSIAENVKHISLTELFASVLSKMSENGISCSIEDLCAWPYLQSKITGSAFRSFDMNKVLEFGALLASGGQEYDIGNDSIKNPKERLVRQKQNLRRRLGLDVCEQFMDISDVIRDEDLMVSKSDPHLNGIDRRVFTSCSAHNIQKMVANMVPSVKSKWPSARELNLLKRKAKINSKDQTKGWCEDGGTEASGAQSLTPKGTCPDSLNYSKVFMDVNHDDDGFEHDGDGQWPFHTFVEQLIIDMFDPVWEVRHGSVMALREILAHQGASAGVFKPDSHLGGTLFIELEDKSIPTTLKREREIDLNMQVSADEFDSNLKRPKLEDVSSPTFMDSVMTCNNITSETLGCNLTLDYENGQFNGNSNDMDLESHSDGSRDACKESASITEQKGHLDDNQMPSGNLIALRNLPQNCELMNSVKVARSSWLQNCEFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPALVNETLNILLRMQCRPEWEIRHGSLLGIKYLVAVRQEMLSDLLGGVLPACKSGLEDPDDDVRAVAADALIPAASAIVSLQDQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDMSPNMYEVLRLGDKEMENEGGGGGGDCDGEENPYVLSTLAQRLWPFMRHSITSVRYSAIRTLERLLEAGYKRSMSELSGASFWPSSIFGDTLRIVFQNLLLETNEDILQCSERVWSLLVQCSMEDLEMAASSYGASWIELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENEFGMEFSLDSIKGSIPQDRNGDVPMNSVKIVVGADVDTSVTHTRVVTATALGYFASKLPVGSLKYVIDPLWSSLTSFSGVQRQVASMVLISWFKEIKLNNSSKNLDGIPGALKGWLLDLLACSDPAFPTKDSLLPYAELSRTYAKMRSEAGQLLNVVKSSGMFDELLTATQIELDRLSVDDAIGFASKIPALCNDSSANEFLAKNIMDDIESSKQRLLTTSGYLKCVQSNLHVTVTSAVAAAVVWMSEFPTRLTPIILPLMASIRREQEEILQMKSAEALAELMYHCVARKPCPNDKLIKNICSLTCMDPSETPQAKSLCTIESIDDQGLLSFRTPVSKQKSKVHVLAGEDRSKVEGFLSRRGSELSLRLLCEKFGASLFDKLPKLWDCLTEVLKPIEDTEEKQVTVSIESVSDPQTLINNIQVVRSVAPVLNEELKPKLLTLLPCIFKCVQHSHVAVRLAASRCITSLAQSMTVKVMGAVVENAIPMLEDSSSVYARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGVSRNAEDLQFLEQLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRSTIGNEDLLASLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQERILLRDQFCKHNVIITSYDVVRKDVDFLGQLLWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQAAYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQYKLYEQFSGSRVKQEMSSIVTTNESAAPEGSGTSTKASSHVFQAIIFLQLLALQYLLKLCSHPLLVTGEKIPDSLSPILLELFPAGSDIVSELHKLHHSPKLVALHEILEECGIGVDNSGSEGAVNVGQHRVLIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVASEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMKTMNTDQLLDLFASAETSKKGANAVKSSENNSDGDAKLVGSGKRLKSILGGLEELWDQSQYTEEYNLSQFLARLNG | 2047 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g02853 | 2047 | FunFam | TATA-binding protein-associated factor | 1685 | 2011 | - | - | |
| Vimu5g02853 | 2047 | SUPERFAMILY | ARM repeat | 6 | 1482 | IPR016024 | - | |
| Vimu5g02853 | 2047 | CDD | SF2_C_SNF | 1798 | 1940 | - | - | |
| Vimu5g02853 | 2047 | MobiDBLite | consensus disorder prediction | 245 | 266 | - | - | |
| Vimu5g02853 | 2047 | CDD | DEXHc_Mot1 | 1443 | 1675 | IPR044078 | GO:0005524 | |
| Vimu5g02853 | 2047 | Pfam | Domain of unknown function (DUF3535) | 777 | 1231 | IPR022707 | - | |
| Vimu5g02853 | 2047 | Gene3D | - | 4 | 94 | IPR011989 | - | |
| Vimu5g02853 | 2047 | FunFam | TATA-binding protein-associated factor BTAF1 | 1195 | 1401 | - | - | |
| Vimu5g02853 | 2047 | FunFam | B-TFIID TATA-box-binding protein-associated factor 1 | 1413 | 1674 | - | - | |
| Vimu5g02853 | 2047 | MobiDBLite | consensus disorder prediction | 428 | 462 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu5g02853 | K15192 | - | gmx:100777977 | 3593.9 |
Showing 1 to 1 of 1 entries