Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02834 ATGTCGTCCAACCCTCCCCCGCCGCCGCACTCTTCGCACAAACCCGGTCAAGACCATCCTGCCCCTGGAAATCCGTCATCACCAGCCGGAAGAGCTAAGCTCCTGAAGATCCCGCCCATTCCTATTCGACGGAGTAATTTAGGCAATGAAGAGGAGAAAGAAGAGGAAGATGAATGCTCTGAATCTTCTTCCATCTTGCTGGCGTCCTCTTTAGGGCTCAATAACATTCGAACGCGTTCTTCCGCTTCGCCTCTTCGTTATTCCTCCTCCGTTGGCGCTCCTTCCTTTCTCACACAGAATGCTGCTGTCACCATCAATGACGCCAGATTTAGAACAAGATTGAATTCTCATCCACAAAGAGACCTAGGGGAAAAAGTTCATTTGCATCAATCCAGATCGCTCAGAGCTCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGGAGCTTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCTTGCGACTTACTAGTGGACGCAAAAAGAGAAATCCTGATATCAAAAGCTTTTCCCATGAACTCAACTCCAAGGGAGTCAAACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGGGGCGATTAGAGCTAAGTTTGAGAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGCATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAGGCTGGAGGATCTGTTGATTGTTGCTCAACAATGTGCAAAGATGTCTCCTACCCAGTTTTGGATCAAATGCGAGACTATAGTTCAAAATCTAGATGACAAACGTCAAGAATTGCCAGTGGGGATACTCAAGCAAGCTCATACACGTCTACTGTTTATTCTCACTCGTTGCACTCGATTAGTGCAATTTCAGAAGGAAAGCGGAATTGAACAAGACCACATTCTGGGTCTTCACCAACTCAGCGACCTTGGGGTCTATTCTGAGCAAATTTTGAAGGCTGAACAGGAAAATTCTAGTATTCAACCTGCTGGACACGAGACCTCTGACAAACAGTTAAAAATGTCACGTAGTAAAGAGAAAGGCAAAGCGATAACAACACAGGGTAAAGCTGACCAACAAGTAAGTGTGGCGATTGACAACCCGGAGGTTAGTACAGCCAAGAGTGTTGAATCAACTCCTGGCAGCTATAGGATGTCTTCTTGGAGAAAGTTTCCAACTGCTGAGAAAAAGCGAAAAGATCAAGATGCTGCAGATACCCCATCCAAAGGTGAAATGGACCACTTGCTAATTAATGCTGAAAATTTGGATACTTCCTCTTGTCATCCTGAACATTCACAATCATCCTTAAGAACACAAAAGGTTTCTTGGGGATTTTGGGGAGACCACCATACTCTTACATACGGGGATTCGATGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAACGAGCGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATAATGGAATTCTGGACACCAAAAAGCACACCCAAAAGCACTGATACTCCTGGAGAAAGCTTTGACCTCGCCGCTTCAAATGTGCTTGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACACTTAGATGCTCTGAAGACATGCTCGACTCTACAGATCCTGACAATACTTTTCTCATGGACGATCTGAACCTTTCACCTAGAACATCATGCGAGGCTCGCATCTGTGTAAAACCTGATCATGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAGGTGGAACTGTTACTAAGTGGACGGAGAACATTGTCTGAACTTGAAAGTTGTGAACAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTCGCAAATGTGAACAACTGTGACTACAGTGCTTTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCCCTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCCCTTTGCGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGCGTAGCTGATGAAGAGAGTTCAGTGGAAGATGATGCAGTTCGTAGCCTTCGTGCTAGCCCTATTAATACTTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCCATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACCGGTTCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTTTATCTAGTTATGGAGTACTTGAATGGTGGAGATCTTTATTCGATGTTGAGAAATCTAGGGTGCTTAGATGA 2466 0.438 MSSNPPPPPHSSHKPGQDHPAPGNPSSPAGRAKLLKIPPIPIRRSNLGNEEEKEEEDECSESSSILLASSLGLNNIRTRSSASPLRYSSSVGAPSFLTQNAAVTINDARFRTRLNSHPQRDLGEKVHLHQSRSLRAHSQLIPVLEGHHGAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVKPFPIWKHRAFGHMEEVMGAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLVCDREWRERLEDLLIVAQQCAKMSPTQFWIKCETIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGIEQDHILGLHQLSDLGVYSEQILKAEQENSSIQPAGHETSDKQLKMSRSKEKGKAITTQGKADQQVSVAIDNPEVSTAKSVESTPGSYRMSSWRKFPTAEKKRKDQDAADTPSKGEMDHLLINAENLDTSSCHPEHSQSSLRTQKVSWGFWGDHHTLTYGDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERIMEFWTPKSTPKSTDTPGESFDLAASNVLEEFNDLSLERNNLTLRCSEDMLDSTDPDNTFLMDDLNLSPRTSCEARICVKPDHGTKVSSAGSLTPRSPLVTPRTTQVELLLSGRRTLSELESCEQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYISLCGQIEDEKVDSSTSVADEESSVEDDAVRSLRASPINTCSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGSIFLLFHMSGKSLSSYGVLEWWRSLFDVEKSRVLR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02834 821 MobiDBLite consensus disorder prediction 374 407 - -
Vimu5g02834 821 MobiDBLite consensus disorder prediction 1 15 - -
Vimu5g02834 821 MobiDBLite consensus disorder prediction 357 373 - -
Vimu5g02834 821 MobiDBLite consensus disorder prediction 411 430 - -
Vimu5g02834 821 MobiDBLite consensus disorder prediction 344 431 - -
Vimu5g02834 821 Gene3D Phosphorylase Kinase; domain 1 685 791 - -
Vimu5g02834 821 PANTHER SERINE/THREONINE-PROTEIN KINASE 442 790 - -
Vimu5g02834 821 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02834 Vimu-Chr5 37613885 37623082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02834 32 791 AGC Kinase Gene Family AT5G62310 54.705 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02834 - - gmx:100817975 1240.33