Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02824 ATGTCTTCGGATGATAGTATGTCTTCCAGATTGAGGGCGATCAAACATGGAGCTTGTGATTATTGGATTAAACCTTTCCATGAGTTTCATTTGAAGAATAAGTTGACACGTCTACTTCAGAAGAAGTGCGTAAGTGCAGATAAGCTGCAAAAGGATAATGGTAGCTTGGAAGATCATAATAAAAGAAGAGGAATAAGTGATAATTCTGAACTGGCTTCATCTATGGTTCATAGAAGCAATAGCATGTCTGAAGAAAGCGATGATGTTGATGAATCAAGTAATCCACCTCCCGCCAAGAAGCCTCGTGTAGTATGGGATAAAAAACTGAATGATTCCTTTCTCAACGCCGTCAATATACTTGGAATTGATAGTATGATATGTTATTTTTATGAAACCAGTTCAGAATTATCATTTATTGCTCTTATTAAGCAAGCATTGTTTTGTATTGACAGTTTTACTTTTTCTTAA 468 0.3547 MSSDDSMSSRLRAIKHGACDYWIKPFHEFHLKNKLTRLLQKKCVSADKLQKDNGSLEDHNKRRGISDNSELASSMVHRSNSMSEESDDVDESSNPPPAKKPRVVWDKKLNDSFLNAVNILGIDSMICYFYETSSELSFIALIKQALFCIDSFTFS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02824 155 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Vimu5g02824 155 Gene3D - 1 97 - -
Vimu5g02824 155 Gene3D - 98 143 - -
Vimu5g02824 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 125 IPR045279 GO:0009736
Vimu5g02824 155 MobiDBLite consensus disorder prediction 50 66 - -
Vimu5g02824 155 SUPERFAMILY CheY-like 1 56 IPR011006 -
Vimu5g02824 155 MobiDBLite consensus disorder prediction 50 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02824 Vimu-Chr5 37572845 37573312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02824 1 126 Response Regulator Gene Family AT4G16110 35.766 1.91e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02824 - - vra:106778015 219.935