Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02776 TTGACTTGTCGCATCAAAGAGGATGCCGACTCGGGCCTTCTGTCGGTGGTATCAATATTTTTCTCAGTGGTGCATGTCCCTGTAGTCGTGACACAGATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTGCTAAAGCCATCAAGCGAGTTGAGAATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGATATCAGACCCTGGCATGGTAATATATGTCGCAGAAATTATTGAATTAACTGAACATATATCATCGATTATGGAGAGTGGTGAAGGAGTACAAAGTAATACTATAAAAGACAAGGCTGTGGTAGAGATGAGAGAACAAATAACGAACTTGTTTCAAGCGTACATAGATACTGATGGAGATGGTATTACTCTCAAGAGAGCATTGGCACTATCAACAATCAATAACATGGCACAGAACATCTGCGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTTCCATTCCACAGGAACCAGCGTCAGGACGGAAAATTGGATGGTGGAAATCCAGGCTTCAGACATGTGAACCGAAAGTTATTAAAGAACTCTCCTTGTTCGGTGGGAATTCTAGTGAACAGAGGTTTTGGGTCAATTGGGAAAATATCAAGGTCTCAGCCATCAGTTAAAGTAGCAGCAATATTCATTGGAGGAAGAGATGATAGAGAGGCACTTTGCTATGTGGGTCGTGTGGCATGGCATCAGGGAGTACACGTGACAGTGATAAGATTCCTGGTAGATACCAGTGCAGAATCTACAAGACTGGCGGCTTATAGGGTCAGCCTCCCAGAGGAGGAAGAGATGGGATTGGATGATGAATGCTTTGCACAGTTCTATGAACAGCATATAGTTGGAGGTCGCATTGCTTATTTGGAGAAGCATCTTGCAAATGCATCAGAGACCTTCTCTACTCTTAGATCATTTGAAGGGGAATACTCACTTGTCATTGTAGGAAGAAAAGCTGGAGCAAACTCCGTATTGACAAAGGGTATGAATGACTGGCAACAGTGTCCAGAACTCGGACCAATAGGGGACGTTCTTTCAGGACCAGACTTTTCAAAGTCAGTCTCTGTATTGATAATTCAACAACACAAACTTAGAGGAGAACTAGATGGCCTTGACGAGGACTTCACTATCATGTAG 1206 0.4353 MTCRIKEDADSGLLSVVSIFFSVVHVPVVVTQIIKRARKRAPTHSNALQLLKPSSELRIFLCLHGLDNVPASINFMEISRGISDPGMVIYVAEIIELTEHISSIMESGEGVQSNTIKDKAVVEMREQITNLFQAYIDTDGDGITLKRALALSTINNMAQNICVLAEDLMIALIILPFHRNQRQDGKLDGGNPGFRHVNRKLLKNSPCSVGILVNRGFGSIGKISRSQPSVKVAAIFIGGRDDREALCYVGRVAWHQGVHVTVIRFLVDTSAESTRLAAYRVSLPEEEEMGLDDECFAQFYEQHIVGGRIAYLEKHLANASETFSTLRSFEGEYSLVIVGRKAGANSVLTKGMNDWQQCPELGPIGDVLSGPDFSKSVSVLIIQQHKLRGELDGLDEDFTIM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02776 401 PANTHER CATION/H + ANTIPORTER 16 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02776 Vimu-Chr5 37289137 37290435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02776 2 401 Antiporter Super Family AT3G52080 52.798 1.19e-140 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02776 K26731 - gmx:100815945 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02776 5 37289137 37290435 Vimu5g02776 5 37289137 37290435 ECH
Vimu5g02776 5 37289137 37290435 Vimu4g02074 4 23043833 23047331 PCT