Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02775 ATGGCAATAGCGTTCACTCAATGTTCAGAAAAGCTAGGGTACCTCATTCTTCAGTTAGCAAAAAATTTCATGGTGTATATGGCCATGGTGCTTGCATGCAACGGTTTACATTTCCTTCTAAAGCCCTATTCACAACCTCGCATTACTTCTGACATAGTTGTAGGAATGGTATTGGGGAACATACCTTTTTTACGAAAACTGTTCGATGAATTCAACAGAGCCTTTGGATTTATCATGGATTTTGGGATGATGTGTTACATGTTTGCATTGGGTATAGAGATGGATCCCAGCCTACTGTTCAAACGCCCGAACAAGGATGCTCTGGTTGCATACACGGCGATACTCTGCACCTTCCTGGTATCCCTTTCATTGATCCCATTTCTCCATTTCTTCTCACGGCATACTGGCGTAGCCTTCACCATCTCCGTCTCTGCTCTTCTAGCGAGCTCAGCATCTCCAGTTCTCACGCGATTACTAACAAATATGAAGATAGGAAAATCAGACATTGGAAAGCTTGTGATAGCAGCAGGAATGCACTCGGATTTAGTCTGCTTGTTGATTTTCTCAATTTGCTACATTTTCATGCCAACCGATGCATACTGCATTGGGCACCACAGTGAAAGGACGCTGAAGAACGACATAAAAACGATAATTGCGGTGGTGGTGCAGACGACGTTCACGGCGATGGTTTCGCCGGTTTTCATGGCATGGGTGAACAATGAGAACCCTGAAGGCAGACCCATGAAAGGGTCGCATCTGGTATTGTCGGTTGCCTTCATGGTCTTGATTTGCTCCCCCTCGACTCTATACGACTTTAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTCTTCCCCGTGATGGAAGAGTTTCGAAATGGATTATCAGCAAAATCAACTACATCTTGTCCACCATCTTCTTTCCCATCTTCTTCTTGTGGATGGGCAATGCAGCTAATTTCACCCAATTCAGACCTGGAGACCCTACAACTTGGTTAAGGTTTTTTATACCTATTTTCATAGTCTTCACAGGTAAAATTGTTGGCACACTCATTTCTGGGGCAATACTTGGATTTAACTGGCGGGAATCTATTTTAATCGGATTGCTCCTCATCACCAAGGGCCATTTTCAAATCTACATGGCAATCAAAGTGGCAAGTATTTTCCTAGATTACTTGCATTCCAAGTGGTACCTTTTATCATGTTCACGTTTCCATCCTTGA 1224 0.4355 MAIAFTQCSEKLGYLILQLAKNFMVYMAMVLACNGLHFLLKPYSQPRITSDIVVGMVLGNIPFLRKLFDEFNRAFGFIMDFGMMCYMFALGIEMDPSLLFKRPNKDALVAYTAILCTFLVSLSLIPFLHFFSRHTGVAFTISVSALLASSASPVLTRLLTNMKIGKSDIGKLVIAAGMHSDLVCLLIFSICYIFMPTDAYCIGHHSERTLKNDIKTIIAVVVQTTFTAMVSPVFMAWVNNENPEGRPMKGSHLVLSVAFMVLICSPSTLYDFSPVLSAFMTGICLPRDGRVSKWIISKINYILSTIFFPIFFLWMGNAANFTQFRPGDPTTWLRFFIPIFIVFTGKIVGTLISGAILGFNWRESILIGLLLITKGHFQIYMAIKVASIFLDYLHSKWYLLSCSRFHP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02775 407 PANTHER CATION/H + ANTIPORTER 23 381 - -
Vimu5g02775 407 Gene3D - 20 391 IPR038770 -
Vimu5g02775 407 Pfam Sodium/hydrogen exchanger family 27 385 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02775 Vimu-Chr5 37287686 37289008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02775 8 382 Antiporter Super Family AT3G52080 43.669 1.67e-107 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02775 K26731 - gmx:100815945 592.808