Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02751 ATGGCAGAGAGTGTAGTTTCCTTTGTTTTAGATCACTTAGCCCAGCTTGCCTCACGCGAAGCTAACTTGCTCTATGGCGTGGAGGATAGAGTCCAGTCCCTTCAGTACGAACTTCAAATGATCAAAGAGCTCCTCAATACCACAACGAGAAAGAAGGGAATGGAACATACTGTATTGAACCAAATCAGAGATGTGGCTTACGTAGCTGAGGATGTCATCGACACATTCGTAACCAAAGTTTCCATTTACAAGAGGAGAACCATTCTGGGGAGGATGCTCCGTGGCTTTGGCCAAGCAAGGTTGCTCCACCACGTATCCCACAAAATAGACAAGGTCAAAACCACTCTCAACGAGATACGCGACAACAAGGACAAATATGATGCTTTCAAAGAAATCAATAATCAATCCGCAGCAGAAGAAGCGGAGGAGGAGAAAAGGGCACAATCACTGCAAAGGCTAAGAAGAAATGTGGAGGAAGAAGATGTAGTTGGCTTTATCCATGACTCCAAGGATGTCATCAACCTACTCCTGGAAGGTGGTTCAAATCGTAAAGCTGTCTCTATTGTTGGCATGGGGGGATTGGGAAAGACCACTCTTGCCCGAAAGGTCTATAACTGCAGCCAAGTAAAGCAACACTTCATGTGTCGGGCATGGGTTTATGTGTCAAATGAGTGCAAAGTTAAGGATCTTTTGATTGGCCTTTTTAAGCATTTGATGCTAAATTTTGAAGAGCAACGTAGAGGCAACAAAAGGGGTAAAAAAAACGCAGGAGACGTTAACGACCTTAGTGAGGAGGAACTGAAGGAATTAGTGCGAAACTGTTTGGAGTGGAAAAGGTATCTTGTGGTGGTAGATGACCTATGGAAAAAGCAAGATTGGGACGAGGTGCAAGATGCTTTCCCGGACAACAACAAAGGCAGCAGAATATTGATCACTAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGGCTATGATGTTCCTCACTATCTTCAATTCCTAAATGAAGAAGAAAGTTGGGAATTGTTTTGCAGGAAAGTGTTTAGGGGTGAAGACTACTCTTCTGATTTGGAGCCTTTGGGGAAGCAGATGGTTCGAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTCTTAGGAGGGTTGTTAGCCAACAAGGAAAAGTCAGATAGAGAATGGTCTAAAGTGGTAGGTCATGTTAATTGGTATCTGACTCGAGATGAGACCCAAGTGAAGGATATAGTTCTGAAACTCAGCTACGACAACTTGCCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGGTTATTTCCTGAAGACTTTGAAATACCTGTTACCCCATTATTGCAAAAATGGGTTGCTGAAGGTTTTATACAAGATACAGGAAATAGAGACCCAGATGATGTTGCAGAAGACTACTTGTACGAGCTCATCGATCGTAGTTTGGTCCAGGTAGCAAAAGTGAGGTCTAAAGGAGGTTTAGAGACGTGTCAAGTTCATGATCTTCTTCGAGATCTTTGTATATCAAAGAGCAAAGAGGACAAAATGTTTGAAGTTTGCACAGACAATAGCAACCTAATCCCTACCAAGCCTCGCATATTGTCTATTCATAGTGACACAGGTCACTACATTTCTTCAAGCAATAATGATCATTCATGTATTCGTTCCCTGTTTTTCTTTGGGTCAGGTTATCGTGTTCGTGGGAGAGAGTGGAAACGACTTTTGGACGATTTCAAATTGGTTCGAGTGTTAGAGTTTGGAGCTAGCAACTGCCGAGAGATCCCTTCCGGTTTAGGGAAGTTCATCCACTTAAGGTACTTGAGAATAGATTCAAGGTGTGCTACATTTGTTCCAGATTCAATACTTAACCTTTGGAATCTACAAACCATAGACATGGGTATTTTGAAGTATCACAGTCCAATTTCTTTCCCTATTCAAATGTGGAAACTCAAACATTTAAGACATTTGAATACACATGGGCCTATCCAATTACGAGGAAGGTGTTCAGAATCTGATAAGAAGATGTGGAATCTTCAAACCATTCCTCCTCTTATACTCAATACGCAAGCAACATCTCTAGTAAAGAAAGGAACATTTCCTAATATTAAGAAGATGGGGTTCGTGGAAGCAAATGGTTATGAAGGTGAGTTACCCAATTTGTTGCAAAACCTGCAACAATTAAATCATTTGAATAAATTAGTGATTTTGCCCCCACTTTGGCGTGGTTGCAAGCCACAAGAACTGGTTCAAAACCTAGGACAATTAAGTTGTTTAACTATCTTAATGATTGAGAATGTTTTGGACCTTCTAACCTTTAAGCTCATATTTCCCCGAAATATTACAGAGTTAACATTGTCAGGGATTACGTGCATTATTGATGAGGGGATGAATAGTCTCGCAAATCACTCCAAACTCAAAGTTTTGAGACTTTGGGGACGTTTTCGGTTGGTGGATTCCATTGACCTCAATTTTGTGGATGGTGGCTTCCCACAGCTTGAGGTGTTGCAAATGAGAGGGTTGCCAATTCGAAAGTTGGAATTAGGCAATGGTACAATGTGCAGGCTTCAAAATGTGCTTATTGACGGTTGTGAACCATTAGATAGTTTTTTAACTGGACTCTGTTTTTTGAATGGATTGAAAAAAATACACATAACTAGATTTCTTTCAGAAGAAGAAATGGCTCACATCTTTCAAATTTTAGAAAGAAATAATGAAATTCAAATAGTTAAAGGAACTCCTCCACCTATAGATAACGAGGATTATTGGTTTTTATGTTTAGATATTTAA 2781 0.407 MAESVVSFVLDHLAQLASREANLLYGVEDRVQSLQYELQMIKELLNTTTRKKGMEHTVLNQIRDVAYVAEDVIDTFVTKVSIYKRRTILGRMLRGFGQARLLHHVSHKIDKVKTTLNEIRDNKDKYDAFKEINNQSAAEEAEEEKRAQSLQRLRRNVEEEDVVGFIHDSKDVINLLLEGGSNRKAVSIVGMGGLGKTTLARKVYNCSQVKQHFMCRAWVYVSNECKVKDLLIGLFKHLMLNFEEQRRGNKRGKKNAGDVNDLSEEELKELVRNCLEWKRYLVVVDDLWKKQDWDEVQDAFPDNNKGSRILITSRLKEVALHAGYDVPHYLQFLNEEESWELFCRKVFRGEDYSSDLEPLGKQMVRSCRGLPLSIIVLGGLLANKEKSDREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGLFPEDFEIPVTPLLQKWVAEGFIQDTGNRDPDDVAEDYLYELIDRSLVQVAKVRSKGGLETCQVHDLLRDLCISKSKEDKMFEVCTDNSNLIPTKPRILSIHSDTGHYISSSNNDHSCIRSLFFFGSGYRVRGREWKRLLDDFKLVRVLEFGASNCREIPSGLGKFIHLRYLRIDSRCATFVPDSILNLWNLQTIDMGILKYHSPISFPIQMWKLKHLRHLNTHGPIQLRGRCSESDKKMWNLQTIPPLILNTQATSLVKKGTFPNIKKMGFVEANGYEGELPNLLQNLQQLNHLNKLVILPPLWRGCKPQELVQNLGQLSCLTILMIENVLDLLTFKLIFPRNITELTLSGITCIIDEGMNSLANHSKLKVLRLWGRFRLVDSIDLNFVDGGFPQLEVLQMRGLPIRKLELGNGTMCRLQNVLIDGCEPLDSFLTGLCFLNGLKKIHITRFLSEEEMAHIFQILERNNEIQIVKGTPPPIDNEDYWFLCLDI 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02751 926 PRINTS Disease resistance protein signature 185 200 - -
Vimu5g02751 926 PRINTS Disease resistance protein signature 274 288 - -
Vimu5g02751 926 PRINTS Disease resistance protein signature 367 381 - -
Vimu5g02751 926 CDD RX-CC_like 2 121 IPR038005 -
Vimu5g02751 926 Gene3D Ribonuclease Inhibitor 538 906 IPR032675 -
Vimu5g02751 926 FunFam Probable disease resistance protein At1g63360 418 507 - -
Vimu5g02751 926 Gene3D - 5 113 - -
Vimu5g02751 926 FunFam Probable disease resistance protein At1g61300 144 327 - -
Vimu5g02751 926 Coils Coil 140 160 - -
Vimu5g02751 926 Gene3D - 418 509 IPR036388 -
Vimu5g02751 926 PANTHER DISEASE RESISTANCE PROTEIN RP 32 853 IPR044974 GO:0006952
Vimu5g02751 926 Gene3D - 332 417 IPR042197 -
Vimu5g02751 926 Pfam NB-ARC domain 171 420 IPR002182 GO:0043531
Vimu5g02751 926 Gene3D - 147 325 IPR027417 -
Vimu5g02751 926 SUPERFAMILY L domain-like 496 884 - -
Vimu5g02751 926 Pfam Rx N-terminal domain 5 81 IPR041118 -
Vimu5g02751 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 432 IPR027417 -
Vimu5g02751 926 FunFam Probable disease resistance protein At5g66910 332 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02751 Vimu-Chr5 37133050 37135830 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02751 184 504 WRKY Transcription Factor Family AT5G45050 25.538 2.57e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02751 - - vra:106779070 1345.1