Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02750 ATGGCTGATTCCACTCCGACTGCAACTCCTTCAAACGACACCGAATCATGCGTTTTCCATCGAACGGTTACTCACGCTCCTTTCGTTCTCAATCCTTCTTTCAATTTCCCCCTTCCCAAATTTTCAATTCTAACACTGTTTTTACCATTTCCGAAGGTCACTTTATATGATTGGTGGTTGATTAAAGCCACAAACGACTTCCAAGGAAAGCGTTTAGCCGTTGCAGGCGTCTCATCGAGAAAGGATGAGGCAATGCGCGTGTTTGTTTCTGCTCCCGTTATCAAAAGATACGACATGTTTTCTCTCAAGACTGCGGATGGGATATACCTTTTAATTAGTGGCTTCATCAACGAGCAGCGCAGTGTTGAAAACGGTTTCGACCCTCAGGTTTTGGACCGATTTTTCTTTGGCTTCCCTCCGGACTGGGAAAGCCATGCTCTAGATTTCTTCAAAGAAGAATCAACCACGGGGAATGATTTGGGTAGTGCTTGTCTTGATGACGTACTGGCTAGCTGTCCAGAAATTTTATCTGATGGTAAATATTCGAATGATGAGGCACCGGGAGATCACGAAAAGCTATTCCCTAGATATGATTGCATAGTGTCAAAGGGGATAGGTGGGGTTATCATCTCCTTTCTATCCAATTTCTATATAGATTTTTTAGTTGCAATCGCAGGTGTGGAAAATTGCATTCCTACTTTTTCTGCATCACCGGAAAAGGCGCAGGGTGATCAGGAAAAGGCATTCCCTGAAAATGAATGCAACGTGTCAAAGGAGGTGACTGGTGTTAAGGTTACTTCTAGTAGAGGTAGGGAAAGACGAAGTGCCAAGTTGCATGATGTTGAAGTATACCAGCGGAAGAAACCGTCTTCTTCTGGATTGCCTCCGAAGAATCCAAATAATAAGAACCATATTTCAGTGGCGGCCTTAGACAATTGTGATGAAGTGGGACCAAAAAGTCCGGAAACACCTATTCAGTCACAACCATGGAGACAACTACGCACATCATCTGAACAGATAGTCAAAAAGTCTGCGTCTGTAGTTTCTAGAACATTATCACCAAGGACCGAAGGCTGTCATAAGAAAAAAGTCGGCAGGCCTAAGGGACTACGGAATAAATCTGCTTCTGCTGGGAAAAGTTCGCGATTAAGAGATCCAAGTCACTTGACCAAGGGAAGCGAACAGAAAAAATCAACTGTTTCTCCTGAGTCATCGAGTTTCAGAACATCCAGATCTGGCAGATTGCTTGTACCTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGATGCGGATCATGTGCTCAAAGAAATTAAGGATGGTGCATCTTTGATATCACCTTGTAGGGTTTCTTCATCGTCATCGAGCAGAGAACATTTGCTTAGATTAAAATATCTATGTGCAGTTGGTGGGTCTTGGGGAAAATCTAGGATTCAACTTAATGGCTTCGAAGGACTGACTTTGATTGAGGTGGGAATGTTGCTGATGAAGTACAGAATGATTAACTGTAGCTGCTTAGAGAAGAAGGAAAACATTGCTTGCGGTTTTGTTTCAATTGAGGATGATATTGCGAATTGTGCGGCTCATGGTAGCATGAAGAAGACGAACCTAGTTGGAGAAAATGATGGGCCTGGAGCTTTGCGCGACAGCGGCAAGGATTGTCGCGCTAACAATGAAGCTCTTGATTTGGATGATTCATGGTTGATGGTGGCTTGCAACATTATTAACGGTGAAGACTTAGCGGTTTGGGTGGTGCGATTCAGCTTTCTCTGTTTCTGGGTACGAGATGTTGGCAGTGGCAGCTTGAGAAAATCATGTAATGGCGGAGGCACCAAGTTTCGTGATTTAGGGGAGATCGTGACTTTGATGGTGGTGGCCATGGAGGTTGCGCGAGATGGCTGCCATGGTTCTCTGCAGGCGCGACTTTACGGCGGCATGGTGACTTTGGACGATCTCTGCGGCGGCTGTGACACTAAGGTCCGATGA 1989 0.4465 MADSTPTATPSNDTESCVFHRTVTHAPFVLNPSFNFPLPKFSILTLFLPFPKVTLYDWWLIKATNDFQGKRLAVAGVSSRKDEAMRVFVSAPVIKRYDMFSLKTADGIYLLISGFINEQRSVENGFDPQVLDRFFFGFPPDWESHALDFFKEESTTGNDLGSACLDDVLASCPEILSDGKYSNDEAPGDHEKLFPRYDCIVSKGIGGVIISFLSNFYIDFLVAIAGVENCIPTFSASPEKAQGDQEKAFPENECNVSKEVTGVKVTSSRGRERRSAKLHDVEVYQRKKPSSSGLPPKNPNNKNHISVAALDNCDEVGPKSPETPIQSQPWRQLRTSSEQIVKKSASVVSRTLSPRTEGCHKKKVGRPKGLRNKSASAGKSSRLRDPSHLTKGSEQKKSTVSPESSSFRTSRSGRLLVPPLEFWRNQIPIYDADHVLKEIKDGASLISPCRVSSSSSSREHLLRLKYLCAVGGSWGKSRIQLNGFEGLTLIEVGMLLMKYRMINCSCLEKKENIACGFVSIEDDIANCAAHGSMKKTNLVGENDGPGALRDSGKDCRANNEALDLDDSWLMVACNIINGEDLAVWVVRFSFLCFWVRDVGSGSLRKSCNGGGTKFRDLGEIVTLMVVAMEVARDGCHGSLQARLYGGMVTLDDLCGGCDTKVR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02750 662 Pfam SANTA (SANT Associated) 53 144 IPR015216 -
Vimu5g02750 662 MobiDBLite consensus disorder prediction 321 353 - -
Vimu5g02750 662 MobiDBLite consensus disorder prediction 265 286 - -
Vimu5g02750 662 MobiDBLite consensus disorder prediction 291 307 - -
Vimu5g02750 662 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 249 442 - -
Vimu5g02750 662 MobiDBLite consensus disorder prediction 263 410 - -
Vimu5g02750 662 MobiDBLite consensus disorder prediction 393 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02750 Vimu-Chr5 37124959 37131559 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vimu5g02750 SANTA 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02750 - - vun:114170070 558.91