Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02703 ATGGAAACTTGGTACATTGTCTCTGTTCTGTGTTTTTTCCTTTGGCTGATTCTCAAATCCACATGCAAAGTTCTCTTTCCTCCACTCCCTCCAGGACCTTCCAAATGCAACTTTGCATTGCTACGAGGATACTTCACTGACCCCAAAACCATTCTTCAAAAACTCGTTGCAAAATATGGTCCAATCTTCTCTGTTCATGTTGGTTATTCTCACACTGATATTTTCATCGCAAGTCGTTTCCTTGCACACCAAGCTTTGATCCAACATGGCACCATCTTCGCTGATCGCCCCAAGGCTAACCCCACCAATAAGGTTATAAGTAGCAACCAACATGACATTCTTTTCAGCTTCTATGGCCCCAGATGGCGCCTCCTTAGGCGTAACCTCACTTCAAGAATCCTTCACCCGTTGCAGGTTAAGTCCTATGCACACGCACGCAAATGGGTCCTAGCGATGATCCTACAAGGTCTCATATCTGATTCTGAGGGTAACAGCCCCGTAAGGGTCATTGACTACTTTCAATATGGCATGTTTTCTTTGATGGTTTTGATGTGCTTTGGTGACAAACTCGATGAGAAGCAAATAAGGGAAATTGAGGGCAGTCAACGTGACATGCTTGTGAGTTATGCTAGGTACAGTATCTTGAACTTTTGGCCAACAGTTACTAGGATTTTGTTCTGGAAGAGGTGGGAGGAGTTCTTGCAGAAGCGGAGAGACCAAGATGCTGTGTTGATTCCTCACATCAATGCTCGAAGGAAGGCAAAGGAAGAGAGAATGTTGGAGGATGAGAAGGGGATACATCTTGATGATGGTAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAGTGGATCATGGCAAATCTGGTGAAATGCCCCAAAATCCAAGAAAGTGTAGTGGGGGAAATTAGAAGGGTGATGGTTGGTAGAGAGGATAGGGAAGTGAAGGAGGAGGATTTGCACAAATTGCCTTATCTCAAGGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCTCCGTTACACTTTGTGGCTCCTCACAGGGTAACTAAAGATGTTGTTTTAAATGGTTATTTGGTGCCTACCTATGCCTCAGTGAATTTCTTGGTGGCAGAGATAGGAAGGGACCCTACAGCTTGGGATGATCCCATGGCCTTTAAGCCAGAGAGGTTCATGAACATTGGGGACCAGAATGGAGGCACAACTTTTGACATAATGGGAAGTAAAGAGATAAAGATGATGCCGTTTGGGGCAGGAAGGAGAATGTGTCCTGGCTATGCTTTGGCAATGTTGCACTTGGAGTACTTTGTGGCCAATTTTCTTTGGAATTTTGAGTGGAAGGTTGTGGATGGAGAGCATGTTGATCTTTCAGAGGAGCTGCAATTCACAACTGTAATGAAGAATCCTTTGAAGGTTCATATATTACCCAGGCAATAG 1464 0.4447 METWYIVSVLCFFLWLILKSTCKVLFPPLPPGPSKCNFALLRGYFTDPKTILQKLVAKYGPIFSVHVGYSHTDIFIASRFLAHQALIQHGTIFADRPKANPTNKVISSNQHDILFSFYGPRWRLLRRNLTSRILHPLQVKSYAHARKWVLAMILQGLISDSEGNSPVRVIDYFQYGMFSLMVLMCFGDKLDEKQIREIEGSQRDMLVSYARYSILNFWPTVTRILFWKRWEEFLQKRRDQDAVLIPHINARRKAKEERMLEDEKGIHLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKCPKIQESVVGEIRRVMVGREDREVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNIGDQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAMLHLEYFVANFLWNFEWKVVDGEHVDLSEELQFTTVMKNPLKVHILPRQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02703 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vimu5g02703 487 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 Gene3D Cytochrome P450 24 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 479 - -
Vimu5g02703 487 CDD CYP77_89 58 480 - -
Vimu5g02703 487 FunFam Cytochrome P450 family protein 23 487 - -
Vimu5g02703 487 Pfam Cytochrome P450 28 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02703 487 SUPERFAMILY Cytochrome P450 26 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02703 Vimu-Chr5 36848830 36850362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02703 1 487 Cytochrome P450 AT1G64940 50.000 2.85e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02703 K24184 - gmx:100816275 849.351