Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02691 ATGGCTCCTTCTGGCTGTGTTACCGATTCGATTCCTCCGTCAACAACGCCAGAAGTTGAAGAGAAGGATCTTCGGCCATTCTTTGTTCTTCATAAAGCTTCATCCCGGAAAAAAGATAGAACACCAACTGCACAGGCAAAGTTGTGCAAGACAAATGAATTATCTTCATCACCAGAGAGTGTAAAGAAGTTGGGAGGAAGTATGACGGAGGGATGTGATCTCCATTTGTTTCAACAACTACAAATTGAAGCTTTTGACATTGTTTGGGAAAAGATCGAATCTACCATTAAGGGTGTTTTAAGAGATCTCAATGCCAATGTATTTAATAATATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACCATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAACAATACCACTCCTGGGCAGCTGTTCACTGCTTTTATTGTCACCAGAAACATAGAGTTCGTTGATGATATGTTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGCCATGTGGCTAAGCTTTCATCCCTAGAGTTTTCATTGAAAAATGGGATTGCTGGTTGCTTGAAAGCTCTGTTGCGAGAGTTTGTTGGATGTGTTATTGATGTGGGTGCTTCTGTCAGTTCTTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACATGTAAACTACAATAAACCACTGGTACTGATCATTAATGATTTGGGGAGATGTTCTGGATCAGTCTTAACTGATTTTATCTTGATGCTGAGTGAATGGATTGTCAAGGTGCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCCGAGAAACATTCTGCCATCACATGCTCTTGAGCGTTTGTGTCCCTCTAGTTTTATGCTTGGAACACCTGCCGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACATTGTACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGGAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTTTGAAGGTAGCTTGCCTATTGCATTTCTCAATGGAACCTCTAAGTCTCATACATGGGCGAGCACTGGCTGAAGATCATAAGGAGGGTAAATCTGCAGTATCACCTGAGACACTGCTGAAATACATAGATCAACTTCCATTGCATGCAAGGAATCAAATTGCTGATCATCACACCAAAAAGAGCACGGCTGAGGGTTTGTCAGAATTGGTGACAATGCAGAAACTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTTTGTGAAGCTCTAAGTCAAGATTTGTACCTGTCAACGGGTCCTGATTGTCATGTGGGAAATGAAAGATATTGTGGTTTGTCTTCCACAAATGATTCCAGTCAACAATATTCCATCATGCAAAGCGGTGGTTATATTGGCCAGATAGTACGAAATGTGAGGGATCTCCCCGCAGGGATGCTATATCAGTTAATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCACGAGAAACTGAAAGTGTTGCAATCTTCATTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCCAAGAGGTATGCGTCCAGGATTTCAGTAAACACTGATAAGGATGCAAGAATGCTAAATTCACAAGCTATTGCATTTTTAAACTGTCTAGTTGGGAATTTTTTGAAGCCCATTGAAGGCAAGCCTTTCCACGAAATTTTATGTTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTAATTGGAGATCCAAGAAGAAGAATTCAGGTTGATCTGTTGGAGTTCCATAAGATTTTAAGGTGTAGCTGCTGTAGCAAGAATGGCAATGCTCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTCTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTTCAGTCTTTTAGATCAATTGTTCTTCAAAATAAAAATAAACGGAAGCAAAATACAAAGCAATCCCCACAACCAAAGAAGAGAAAAGCTATAAATGGATCTGCAGACCAAAACGAAGCGTCAATTCAAGCACGCTTTTGCAAGGCAGTTACAGAGCTACAGATCACAGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTTGGACTTTGA 2241 0.4052 MAPSGCVTDSIPPSTTPEVEEKDLRPFFVLHKASSRKKDRTPTAQAKLCKTNELSSSPESVKKLGGSMTEGCDLHLFQQLQIEAFDIVWEKIESTIKGVLRDLNANVFNNIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGQLFTAFIVTRNIEFVDDMLTFEELGHFLKSHGCHVAKLSSLEFSLKNGIAGCLKALLREFVGCVIDVGASVSSSADISILASWYREHVNYNKPLVLIINDLGRCSGSVLTDFILMLSEWIVKVPIIFIFGVATTVDTPRNILPSHALERLCPSSFMLGTPAERMDAIVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSMEPLSLIHGRALAEDHKEGKSAVSPETLLKYIDQLPLHARNQIADHHTKKSTAEGLSELVTMQKLWSTAVLCLYEAGKYSRVRLLDLFCEALSQDLYLSTGPDCHVGNERYCGLSSTNDSSQQYSIMQSGGYIGQIVRNVRDLPAGMLYQLIENWEKLTADISEIHEKLKVLQSSLRCEDGKSPRKSSKDNPKRYASRISVNTDKDARMLNSQAIAFLNCLVGNFLKPIEGKPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCSKNGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRSIVLQNKNKRKQNTKQSPQPKKRKAINGSADQNEASIQARFCKAVTELQITGLVRMPSKRRPDFAQRIAFGL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02691 746 MobiDBLite consensus disorder prediction 16 44 - -
Vimu5g02691 746 MobiDBLite consensus disorder prediction 681 706 - -
Vimu5g02691 746 Pfam Origin recognition complex winged helix C-terminal 617 744 IPR040855 -
Vimu5g02691 746 MobiDBLite consensus disorder prediction 681 697 - -
Vimu5g02691 746 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 78 368 IPR045667 -
Vimu5g02691 746 CDD Orc3 83 744 - -
Vimu5g02691 746 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 745 IPR020795 GO:0003677|GO:0005664|GO:0006260
Vimu5g02691 746 MobiDBLite consensus disorder prediction 1 62 - -
Vimu5g02691 746 MobiDBLite consensus disorder prediction 45 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02691 1 678 Core DNA Replication Machinery Family AT5G16690 45.376 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02691 K02605 - gmx:100780646 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02691 5 36780902 36790673 Vimu5g02691 5 36780902 36790673 ECH