Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02670 ATGCCCACTGCTAATCCGACATGTCCACCACCAATGAAGGCCACCTCCAACGGTGCCTTCCAACATGAAAATCCATTGGATTATGCGCTTCCCCTTCTAATCCTTCAGATATGTCTCGTCGTTGTCTTCACAAGATTCCTTGCATTCATTCTCAAACCTCTCAGACAACCCAGAGTTATTGCAGAGGTTATTGTAAGTTTTCTTTTCTTTCCATTCTACCCTCTGTTCTTTTCTTTGCTTTCTCAGTTAAAAGTTAACGTGGGGTTGGATGCTTCTTGTTTTGGAAAACGAATGCAGGGAGGGATATTACTTGGGCCATCAGCGATTGGGAGGAATGAGAAATTCCTGAACACGATTTTCCCCAAGAAAAGCTTGACTGTGCTTGAAACTGTGGCCAATCTGGGTCTTCTGTTCTTCTTGTTTCTGGTGGGGCTTGAGCTTGACATGCGTTCAATACGCAAAACTGGTCACAAGGCCTTTGCCATTGCCGTTGCAGGCATCACATTGCCTTTTGTGCTCGGCATTGGCACCTCCTATGCTCTTCGAGCCACCGTATCCAAAAAGGCTAATCCAACCTCGTTCCTTATTTTCATGGGTGTTGCCCTCTCCATCACTGCATTTCCCGTCCTTGCACGCATCCTTGCCGAGCTCAAACTCCTCACAACTGATGCTGGTCGCATAGCAATGGCAGCAGCTGCTGTGAATGATGTTGCAGCATGGATACTGCTCGCTCTTGCCATAGCTCTCTCTGGCTCTAACTCATCCCCTCTTGTTTCCTTGTGGGTCATACTCTGTGCTGCCGCTTTTGTCCTCTTGGCTATCTTTGCCATAAACCCCTTGCTCACAATGATGGCCAAGCGTTCCCCTGAGGGTGAACCAGTGCAAGAGATTTACATATGCATCACCTTGACACTGGTCCTGGCTTGCAGTTTTATCACTGATACCATTGGCATTCATGCACTGTTTGGGGCTTTTGTGGTCGGCATAGTCATGCCAAAGGATGGTCCTTTTGCTGGGGTGCTGATCGAGAAGATAGAGGACCTTGTGATGAGTCTGTTGTTGCCACTCTATTTTGTCTCCAGTGGTTTGAAGACTGATGTGACAACCATTAGGGGAACACTTTCTTGGTGTATGCTGGTGCTTGTTATATTCACTGCTTGCTTTGGAAAGATCAGTGGCACATTCGTTGTGTCACTTCTATGTAAGGTTCCTTTTAGAGAAGCCTTGGCTCTTGGATTTCTCATGAACACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTTCTGAATGATCAGACATTTGCAATCTGTGTATTGATGGCACTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTCGAAGGGGATCACCATACACGCATAAAACAGTTCAACGCAAGGATCCAGACACAGAGCTAAGAGTGTTGGCATGCTTCCACAGTACCTACAACATTCCCACCTTAATCAACCTGATAGAGTCATCCCGGGGAACCAGAAAGCGTGGAAAGTTGTGCGTGTATACCATGCACTTGATGGAACTCTCGGAGCGACCTTCAGCCATCACAATGGTTCACACGGCACGCAACAATGGCATGCCCTTCTGGAACAAAAAGCACGATAACAAAGATCAAATGGTGGTTGCATTTCAGGGTTATGGCCAGCTAAGCAGCGTCAACGTTCGTCCCATGACAGCCATATCCCCCTTCAGCAGCATGCACGAAGACATTTGCACCAGTGCACACCAAAAGCGAGTGGCACTAATTCTCCTCCCTTTTCACAAACACCAACACTTTGATGGGACAATGGAGTCACTGGGAAACTCATTGCATGTGATGAACGGCCATGTCCTCAGCCGTGCTCCATGCTCTGTGGGAATTTTGGTTGATCGTGGACTTGGAGGGACAAGACAAGTTCAAGCGAGTGATGTGTCGTACGATGTTGTTGTGGGGTTCTTTGGAGGAAGAGATGATCGTGAAGCACTTGCATATGGAATGAGACTTGCCGAACATCCTGGTATCTCACTCACTGTTGTGAAGTTTGTGGCTGCACCTGGTCAAACATTCGCCTTTGGTGCCAAATTGATCGGTATAACAGCGAACAAGGACAGGAAGATAATAAACGTGGCTGAGGGAACAGGTAATAGTGACGAAGATAAACAAGAGGATGAACAATTTTGGTCGGAGTTCATGACTGTGAGATCCAACAACACGGAATCGATTACGTACGAGGAAAGATTGGTAGACAGCAAAGAAGATTTGAAAGCAGTGTTGAGGGAGAAGAATCGGAGCAATCTTATTTTGGTTGGTAGAATGCCGCAAGTGGCACCTTTGGCAGAAAAAAGTGATTGTCCCGAACTTGGTCCCATTGGAAGCTATTTGGCTTCTTCTGAGTTTTCCACTTTCTCTTCAGTTTTAGTGTTGCAGCAATATAATCCTGAAACTGATGTTTTTCCCATGGTTATGGAGGTTTCTGATTACATGGATGTGCCAGACACACCAACGGGTTTGAATTTGACCAGTTAA 2559 0.4654 MPTANPTCPPPMKATSNGAFQHENPLDYALPLLILQICLVVVFTRFLAFILKPLRQPRVIAEVIVSFLFFPFYPLFFSLLSQLKVNVGLDASCFGKRMQGGILLGPSAIGRNEKFLNTIFPKKSLTVLETVANLGLLFFLFLVGLELDMRSIRKTGHKAFAIAVAGITLPFVLGIGTSYALRATVSKKANPTSFLIFMGVALSITAFPVLARILAELKLLTTDAGRIAMAAAAVNDVAAWILLALAIALSGSNSSPLVSLWVILCAAAFVLLAIFAINPLLTMMAKRSPEGEPVQEIYICITLTLVLACSFITDTIGIHALFGAFVVGIVMPKDGPFAGVLIEKIEDLVMSLLLPLYFVSSGLKTDVTTIRGTLSWCMLVLVIFTACFGKISGTFVVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALFTTFITTPIVMAVYKPARRGSPYTHKTVQRKDPDTELRVLACFHSTYNIPTLINLIESSRGTRKRGKLCVYTMHLMELSERPSAITMVHTARNNGMPFWNKKHDNKDQMVVAFQGYGQLSSVNVRPMTAISPFSSMHEDICTSAHQKRVALILLPFHKHQHFDGTMESLGNSLHVMNGHVLSRAPCSVGILVDRGLGGTRQVQASDVSYDVVVGFFGGRDDREALAYGMRLAEHPGISLTVVKFVAAPGQTFAFGAKLIGITANKDRKIINVAEGTGNSDEDKQEDEQFWSEFMTVRSNNTESITYEERLVDSKEDLKAVLREKNRSNLILVGRMPQVAPLAEKSDCPELGPIGSYLASSEFSTFSSVLVLQQYNPETDVFPMVMEVSDYMDVPDTPTGLNLTS 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02670 852 Gene3D - 32 469 IPR038770 -
Vimu5g02670 852 PANTHER CATION/H + ANTIPORTER 7 823 - -
Vimu5g02670 852 Pfam Sodium/hydrogen exchanger family 101 457 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02670 Vimu-Chr5 36635285 36638059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02670 1 838 Antiporter Super Family AT3G17630 65.833 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02670 K26731 - gmx:100818975 1325.46