Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02605 ATGTCAGGAAATCAGGATGGGTTGCATGCAAAGACTAATACCAATAAAAGAAAAGTTGGCTCAAAACTGCAGAAGATTCAAGCAAAGAAGCGTAAAACTGTGCCTTCAGTTTGTAAGTCAGTAAACCTCAAGGGCAACAAGAAGGCATTGAGTAAGGTACGCCAGGGAAGATCTCGAAACAGTAAGAATATCCAATCAAGTGTACCTCTTCGCCGATCTACTAGGAAGGCCAAATCCCTGTATATGCAAAGTCAAATGAACGGTGGACGTAAAAAAGGAAAGCCCGGTAAAAAGAACGTGGGACGTAAAAAGGGAAAGCAAAGTAAACCCAAGAAGGTGACCTCTCCGGAGTCCAATGAACCTACTGGTGAATATACAAAGTTAGAAGTAACTACACGAGGGACAAGAACAAAGTTCTGTAGCAGCTATTGGCTTAATGGTCTTCGGTTGTCTCGAAAGCCAAATGACGAGCGAGTATTGCTATTTAAAGAGAAAAAGACTATTGTCTCCTCTGAAGACTTTTCTGGCTCTCTTGACTGTCTTAACTGCTGCCTTTGTTGTGGAAATGGATACGCCTTGAATTATATTGCGTGTGAAATGTGTGGAGATTGGTTTCATGGTGATGCTTTTGGGCTTAATGTGGACAATGCCAAACAACTTATTGGATTTAAGTGCCATGTTTGTCTTGATAGAACTGCTCCAATCTGTCCTCATGTGAAAATTAATGCATTTTCTCGTCCTGAAAGCAGTGCTGCAAATGAGTGTGCAGAGGAATTATCTAATCCTGTTTCTCTTCAACCTTTAAGTGAGGGTCTGGTGGCAAATGATTATTTTAATATAAAAAGAATTGTCCTTAGACAGGTTCAGTGTAGGATGCCTTGA 882 0.4082 MSGNQDGLHAKTNTNKRKVGSKLQKIQAKKRKTVPSVCKSVNLKGNKKALSKVRQGRSRNSKNIQSSVPLRRSTRKAKSLYMQSQMNGGRKKGKPGKKNVGRKKGKQSKPKKVTSPESNEPTGEYTKLEVTTRGTRTKFCSSYWLNGLRLSRKPNDERVLLFKEKKTIVSSEDFSGSLDCLNCCLCCGNGYALNYIACEMCGDWFHGDAFGLNVDNAKQLIGFKCHVCLDRTAPICPHVKINAFSRPESSAANECAEELSNPVSLQPLSEGLVANDYFNIKRIVLRQVQCRMP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02605 293 MobiDBLite consensus disorder prediction 15 29 - -
Vimu5g02605 293 SUPERFAMILY FYVE/PHD zinc finger 170 232 IPR011011 -
Vimu5g02605 293 MobiDBLite consensus disorder prediction 1 128 - -
Vimu5g02605 293 MobiDBLite consensus disorder prediction 112 128 - -
Vimu5g02605 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 235 IPR013083 -
Vimu5g02605 293 MobiDBLite consensus disorder prediction 91 109 - -
Vimu5g02605 293 PANTHER PHD FINGER FAMILY PROTEIN 36 242 - -
Vimu5g02605 293 MobiDBLite consensus disorder prediction 56 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02605 16 240 PHD Transcription Factor Family AT5G12400 36.957 1.51e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02605 - - vun:114169688 452.981