Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02593 ATGATAAGTGCAAAGAGGCTTATTGAAATGGCAAGAAAGTGGCAGAAAATGGCTGCGGGAAAACGCAAGAGAATTTCGTACCCAAGGCAGCATAATCTTGATCGTGTTCATTCTTCAACACCAAACAAGGGTCACTTCGTGGTTTACAGCGTTGATCATAAGCGATTCGTGGTTCCCCTTAAGTATCTCACCACCAGCGTGTTCAAAGAGCTTCTGACATGGTCTGAAGAGGAGTTTGGTTTACCATCTGATGGACCCATTACGTTACCTTGTGATGGCGTCTTCTTGGAGTACGTAATCTCGTTGATTCGGGAACATGTTCCCGAAGATGTTGAGAAGGCTTTGATCACTTCAATGATTACGTGTCACCACTTGGCATCGTCATCGTCATCATCTTCTTCTTCTTGTAGCAATCGTCTTATGCAGAGCAACGGGCAAATGATTATTTATGGCTTTTGA 459 0.4379 MISAKRLIEMARKWQKMAAGKRKRISYPRQHNLDRVHSSTPNKGHFVVYSVDHKRFVVPLKYLTTSVFKELLTWSEEEFGLPSDGPITLPCDGVFLEYVISLIREHVPEDVEKALITSMITCHHLASSSSSSSSSCSNRLMQSNGQMIIYGF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02593 152 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 131 IPR003676 GO:0009733
Vimu5g02593 152 Pfam Auxin responsive protein 12 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02593 Vimu-Chr5 36125746 36127128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02593 3 103 Calmodulin-binding Proteins AT4G34750 32.353 3.97e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02593 - - gmx:100802572 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02593 5 36125746 36127128 Vimu5g02593 5 36125746 36127128 ECH