Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02536 ATGGCACATAGAAATCCAAGCATAGGTTTTGTTCTCACTACGTTGGTGTTGTTAGCCACAGTATGTGATGCACAATTGTCTTCGAAGTTTTATGACAGTACATGTCCCAATGCACTTTCCACCATTAGAACTGTCATTCGTACTGCAGTTTCTAAGGAACGCCGAATAGCTGCATCTCTCATTCGTCTTCATTTTCACGACTGTTTCGTTCAGGGTTGTGATGCATCGATTTTGCTTGATGATAGCTCCTCCATCGAGAGTGAAAAGACTGCACTTCAGAATGTTAACTCTGTAAGGGGATTTAACGTCATCGATCAAGCAAAAACTGAGGTGGAGAAAGTTTGTCCAGGAACTGTATCATGTGCAGACATTTTAGCAGTGGCTGCTCGTGATGCATCATTTGCTGTGGGTGGTCCATCATGGACTGTGAAACTTGGAAGAAGAGATTCTACCACAGCAAGCAAAAGTGAAGCTACTAGTGACCTTCCACTTTTCACAGACGATCTTGACACTCTTATTTCGAGATTCGAAAAGAAGGGACTCACTGCCAGAGACATGGTTACTCTATCTGGTGCTCACACAATTGGGCAAGCTCAATGTTTCACATTCCGTGGAAGGATTTACAACAATGCAAGTGACATTGATGCTGGATTTGCTAGCACTCGTCAACGGGGTTGTCCATTAGTTGTCAGTGAAGATAATGACAAGAAATTGGCAGCACTAGATTTGGTGACACCTAATTCATTTGACAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTTCACTCAGATCAAGTTCTATTTAGTGGAGGTTCTACAGATTCTATTGTGTCCGAATACAGCAAAAATCCTACAACTTTTAAGTCTGACTTTGCAGCTGCTATGATCAAAATGGGAGATATTCAGCCTTTAACTGGTTCAGCTGGAATTATCAGAAACATTTGCAGTTCTATCAACTAA 969 0.4138 MAHRNPSIGFVLTTLVLLATVCDAQLSSKFYDSTCPNALSTIRTVIRTAVSKERRIAASLIRLHFHDCFVQGCDASILLDDSSSIESEKTALQNVNSVRGFNVIDQAKTEVEKVCPGTVSCADILAVAARDASFAVGGPSWTVKLGRRDSTTASKSEATSDLPLFTDDLDTLISRFEKKGLTARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFASTRQRGCPLVVSEDNDKKLAALDLVTPNSFDNNYFKNLIQKKGLLHSDQVLFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIQPLTGSAGIIRNICSSIN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02536 322 Gene3D Peroxidase, domain 2 163 301 - -
Vimu5g02536 322 PANTHER PEROXIDASE 72-RELATED 19 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vimu5g02536 322 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 FunFam Peroxidase 163 301 - -
Vimu5g02536 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vimu5g02536 322 Gene3D - 29 319 - -
Vimu5g02536 322 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Vimu5g02536 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 FunFam Peroxidase 29 168 - -
Vimu5g02536 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g02536 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02536 Vimu-Chr5 35819144 35820542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02536 7 322 Peroxidase AT1G14550 68.125 4.88e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02536 K00430 - gmx:100786161 540.421