Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02533 ATGATTGGAAAAGATTTTGGTGGATGGAAGAATGCATTAGATAGATATGGAAAGAGTGCACATCGAGATGTTCAAAAAATCAGAGTATTGGATGCGTGTGACTTCAACTCAGGAGATGGCATTGATACATTAGTTAATAAATCTTTATTAACTGTTGACAGCCAAAACAAATGTTTGGAGATGCATGACCTGATACAAGACATGGGTAAAGAGATTGCCAAAGAGGAAGCATGGGCTGAAATTGGTGAATGCAGCAGATTGTGGTTTCACGAAGATGTTCTTCAAGTACATGTTGATGATATGATAAGTGATAGACTAATGCTTGATCCCCCACAAAGAGAAGAAATTAATTGTACTGATACTGTATTTGCGAAGATGAAGAATCTTAGAATTCTCATTGTTCGTAATATGAGCTTTTCACATGAATCTAGTTGTCTCTCAAATAACTTAAGGCTACTTGATTGGAAGAATTACCCTTCACAATCCTTCCCTTCAGAATTTTATCCCAGAAAAATTGGGGCATTCAATTTAAGTAGATTTCCTGTGATCGCACTGGAAGAACCATTTAAGCTTACTAACGTATCTATTGTACCTCTGGATATCTATGCTGCCAAAGTCTTCCTTAACAGAGTCAGCAACTTCCTGAAAAGTATAGCAATAAATAACCGATATATCAAAGCTCGCAAATTATGTCAGGCAGGAATCAGGACAGCTTGA 717 0.3682 MIGKDFGGWKNALDRYGKSAHRDVQKIRVLDACDFNSGDGIDTLVNKSLLTVDSQNKCLEMHDLIQDMGKEIAKEEAWAEIGECSRLWFHEDVLQVHVDDMISDRLMLDPPQREEINCTDTVFAKMKNLRILIVRNMSFSHESSCLSNNLRLLDWKNYPSQSFPSEFYPRKIGAFNLSRFPVIALEEPFKLTNVSIVPLDIYAAKVFLNRVSNFLKSIAINNRYIKARKLCQAGIRTA 238
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02533 238 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 185 IPR044974 GO:0006952
Vimu5g02533 238 SUPERFAMILY "Winged helix" DNA-binding domain 38 96 IPR036390 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g02533 Vimu-Chr5 35808804 35809705 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02533 29 177 WRKY Transcription Factor Family AT4G12020 33.750 3.82e-17 78.6