Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02509 GCTCCCAAGCGTGGTGGAAAAGCCCCGGTTCTTGCCTCTAAGAAGAAGCCTGAGAAGGTTACTAACCCGCTTTTTGAGAAGCGTCCGAAGCAGTTCGGAATCGGAGGAGCGTTGCCGCCGAAGAGAGACTTGACTCGGTTCGTCAAGTGGCCCAAGACAGTTCAGATTCAGAGGAAGAAAAGGATTCTGAAGCAGAGGTTGAAGGTTCCTCCAGCTTTGAACCAGTTTACGAAGACACTCGACAAAAACCTAGGTCAGATTAATTTCTACAGTGTTGGATCTGATATAAATATTGTTGTTATGTGA 306 0.4706 APKRGGKAPVLASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLGQINFYSVGSDINIVVM 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02509 101 Gene3D - 50 92 IPR029064 -
Vimu5g02509 101 PRINTS Ribosomal protein L7A family signature 66 85 IPR001921 -
Vimu5g02509 101 PRINTS Ribosomal protein L7A family signature 29 46 IPR001921 -
Vimu5g02509 101 PRINTS Ribosomal protein L7A family signature 46 63 IPR001921 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02509 1 89 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 77.528 4.78e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02509 K02936 - jre:108984551 163.31