Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02455 ATGGTGCCTCGTGATCAAGTATTCAATGTTGGTTCTCTTATATCCAAGCGCTGTTTCAGAGCTGGCAACCAACTATGGTCAATTCTCAAGGTTTACAGCTACTGCTCAATGAATGAACAAGCATTACATTTCACCACTGCTGATGTATCTAAGTTCAAAGCAGAAACTACAATGGGTTTCCGCATACCAGGTATTATTAGACAGCCATCATTTTCTGCTGTCAAAGCAAACAAGGGACTTGAAGTCCCAAAAGGCCATCTTGCAGTGTATGTTGGAGATAAGATGAGGCGGTTTGTGATTCCAGTATCTTTCTTAAATCAACCCTCTTTTCAAAAATTGCTAAGTCGAGCAGAAGAAGAGTTTGGATATGATCATCCAGCTGGTGGTCTTACAATTCCATGCAAGGAGGATGAGTTTCTAAATCATGTTATAATGGTGCTCGGATAG 447 0.4072 MVPRDQVFNVGSLISKRCFRAGNQLWSILKVYSYCSMNEQALHFTTADVSKFKAETTMGFRIPGIIRQPSFSAVKANKGLEVPKGHLAVYVGDKMRRFVIPVSFLNQPSFQKLLSRAEEEFGYDHPAGGLTIPCKEDEFLNHVIMVLG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02455 148 Pfam Auxin responsive protein 76 141 IPR003676 GO:0009733
Vimu5g02455 148 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 78 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02455 Vimu-Chr5 35068452 35069295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02455 81 139 Calmodulin-binding Proteins AT3G43120 57.627 5.42e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02455 K14488 - gmx:100782363 149.828