Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02453 ATGGGCTTCCGCTTACCCGGTATTAGAAGATCATCTATTGCTGTCACCAAAGCAGCTTCCAAAGCTGTGGAGGTCCCAAAAGGCTATATAGCAGTCTATGCTGGAGAGAAAATGAAGCGGTTCGTGATTCCTATTTCATTCTTGAATCAACCTTTATTTCAAGAATTGTTGAGCCAAGCTGAGGAAGAATTCGGGTATGACCATCCAATGGGTGGTATCACAATTCCTTGCAGGGAAGATGCTTTCTTAGATCTCACTTCTCCAAAAATAAGAAAAACCCAAAGTGAGCCCATCGGCCCAAAAAGAAGCAAGAGACTTCGGCTTATTATTATTATCTTTAATAACATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATTCCACAAAAAAAATATCTGA 411 0.3601 MGFRLPGIRRSSIAVTKAASKAVEVPKGYIAVYAGEKMKRFVIPISFLNQPLFQELLSQAEEEFGYDHPMGGITIPCREDAFLDLTSPKIRKTQSEPIGPKRSKRLRLIIIIFNNIIIIIIIIIIIIIIIFHKKNI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02453 136 Pfam Auxin responsive protein 13 85 IPR003676 GO:0009733
Vimu5g02453 136 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02453 Vimu-Chr5 35065222 35066183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02453 24 98 Calmodulin-binding Proteins AT3G43120 45.000 9.28e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02453 K14488 - gmx:100806671 166.392