Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02448 ATACACTATCCTATACCTTCAAAAACAACACAAGTAACCTGCATCATCAAGCATCAACCTTTAGATACATTCTTCATCAATCAAGCATATTTTCCTTGTTCTTCTTGTTTCAGACAAGCACAAAAAATGGGTTTCCATTTACCTGCTATTCGACGGTCATCATTCGGTGCTGATCAACCAACTTCAAAATCAGTAAAAGTTCCAAAGGGATATCTTGCGGTGTACGTTGGAGAGGAAAAGAAGAGGTTTTTGATACCTGTATCATACTTGAGTCATCCTTCATTCCAAGACTTACTAAGTCAACTTGAAGAAGAGTTTGGACATGATCATCCCATGGGTGGCCTCACAATTCCCTACAGTGAAGATGCCTTCCAATGTTTAATTTCTTGCTTGAATAGATAA 402 0.3806 IHYPIPSKTTQVTCIIKHQPLDTFFINQAYFPCSSCFRQAQKMGFHLPAIRRSSFGADQPTSKSVKVPKGYLAVYVGEEKKRFLIPVSYLSHPSFQDLLSQLEEEFGHDHPMGGLTIPYSEDAFQCLISCLNR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02448 133 Pfam Auxin responsive protein 52 131 IPR003676 GO:0009733
Vimu5g02448 133 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 62 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02448 Vimu-Chr5 35040087 35046287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02448 67 133 Calmodulin-binding Proteins AT3G43120 53.731 3.32e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02448 - K14488 gmx:100802934 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02448 5 35040087 35046287 Vimu5g02448 5 35040087 35046287 ECH