Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02446 ATGGGTTTCCGTTTACCTAGTTTGAGAAAGGCGTCCCTTCCAGCAATCCAAGCATCTTCAAAATCTGTGGACATGCCCAAGGGTTACCTTGCTGTCTATGTTGGAGATAAAATGAAGCGATTTATAATCCCTGTATCACACTTGAACCAACCTGCATTTCAAGAACTGTTGAGTCAAACTGAGGAAGAATTTGGGTATGAACATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGATGCTTTCTTGGATATCAATTCTCGCTTGATGAGATCAAAACCATCCATACAATACAAGTGCATGCACATACGAGGGAGGACCCAATTCTTTATGATAAATAATGTAAGTCAAGCAGTGATACCATCTTCGCGTGATCAAGTTAGTTGGTTTATGGTCACAACAGGTTATGGAACTTGTAATCTGGGATCTGAAGATGATACAAGAACGAGAAATTGCCCTACATTTTTATTACGTATCTTTGGTGCTTCTCCTCGTCCGAACAAAATACTACTATCTCTGCCCCTATCTGCCTTGCCTTCGTTCTTGGTTAACAGCAAGAAATTGTATGTTGGAAGACATCTTCACTGCATGGAATGGTCAGGCCTCCCATGGGATGATCATATCCAAACTCTTCCTCAGCTTGACTCAGTAAGTCTTGGAATGAAGCCCTTCGGTATGTCTTCAGATTTTAAAGATGCTTGTCTTGGTGTGAATGATGATGCCCGTCGGATGGAAGCTCGTTTAAGGAAGAAGAACAATCTCAAATTTAAGACAATGAATCTGAATTTTGATGCTTGA 798 0.411 MGFRLPSLRKASLPAIQASSKSVDMPKGYLAVYVGDKMKRFIIPVSHLNQPAFQELLSQTEEEFGYEHPMGGLTIPCREDAFLDINSRLMRSKPSIQYKCMHIRGRTQFFMINNVSQAVIPSSRDQVSWFMVTTGYGTCNLGSEDDTRTRNCPTFLLRIFGASPRPNKILLSLPLSALPSFLVNSKKLYVGRHLHCMEWSGLPWDDHIQTLPQLDSVSLGMKPFGMSSDFKDACLGVNDDARRMEARLRKKNNLKFKTMNLNFDA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02446 265 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Vimu5g02446 265 Pfam Auxin responsive protein 14 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02446 Vimu-Chr5 35025654 35027372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02446 24 82 Calmodulin-binding Proteins AT3G43120 54.237 4.53e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02446 K14488 - gmx:100795597 151.754