Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02440 ATGGTTTGTCCTGTGGAGCAATCAACAATGGGTTTCCGCATAGCAGGTATTATTAGATGGACATCATTTTCGACAACCCAAGCAGCCTCCAAGGCTGTTGAGGTACCTAGAGGCTATCTTGCAGTCTATGTTGGAGATAAAATGAAGCGGTTTGTGATTCCTGTATCATACTTGAACCAACCTTCATTTCAAGAATTACTGAGTCGGACAGAAGAAGAATTTGGGTATGATCATCCAACAGGTGGTCTCACAATTCCATGTCAGGAGGATGAGTTCCTAAACGTTACCTCTTGCTTGAATGATTTGTAA 309 0.4207 MVCPVEQSTMGFRIAGIIRWTSFSTTQAASKAVEVPRGYLAVYVGDKMKRFVIPVSYLNQPSFQELLSRTEEEFGYDHPTGGLTIPCQEDEFLNVTSCLNDL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02440 102 Pfam Auxin responsive protein 24 99 IPR003676 GO:0009733
Vimu5g02440 102 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02440 Vimu-Chr5 35004456 35005539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02440 24 101 Calmodulin-binding Proteins AT3G43120 43.590 2.37e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02440 K14488 - gmx:100789280 174.096