Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02413 TTTGCGGGTGGACAGTGCCAAAGGGTGCTGATAAATGAGTGGGCCACAGGGAGGAGCCCGAAGGTGTGGGAGGATGCACATGTGTTCTCGCCGGAGAGATTCTTGGACTCTGACATCGACGTGAAAGGTCGACACTTTAAGCTGACACCCTTCGGCAGTGGAAGACGCATCTGCCCTGGCTCTCCACTCGCCGTCAGAATGTTGCACCTCATGTTGGGCTCTCTTGTCAACTCCTTCGATTGGAAACTCGAAAACAACATGGAACCTAAGGATATGGACATGGATCAATCGCTTAGGGCAATTCCTGTTCCTCTATAA 318 0.5189 FAGGQCQRVLINEWATGRSPKVWEDAHVFSPERFLDSDIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLVNSFDWKLENNMEPKDMDMDQSLRAIPVPL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02413 105 PRINTS E-class P450 group I signature 12 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02413 105 PRINTS E-class P450 group I signature 48 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02413 105 PRINTS E-class P450 group I signature 58 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02413 105 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 97 - -
Vimu5g02413 105 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 51 60 IPR017972 GO:0005506|GO:0016705
Vimu5g02413 105 Gene3D Cytochrome P450 6 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02413 105 SUPERFAMILY Cytochrome P450 8 103 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02413 105 Pfam Cytochrome P450 8 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02413 Vimu-Chr5 34839398 34839715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02413 8 103 Cytochrome P450 AT2G45550 56.604 7.89e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02413 - - vra:106780577 200.29