Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02371 ATGAAGGACGCAGATGTTTCAAGGCAGATCCAGCAGATGATCAGATTCATCCGCCAAGAAGCTGAGGAGAAGGCGAATGAAATATCTGTTGCTGCTGAAGAAGAATTCAATATTGAGAAGCTGGAAATACTTGAAGCTGAAAAGAAAAAAATCAAGCAAGAGTATGAACGAAAAGCCAAACAGATTGACGTTCGTAGAAAAATTGAATACTCAACACAATTGAATGCATCCCGAATAAAAGTTCTTCAAGCACAGGATGATGCAGTGAATTCCATGAAGGACGCTGCTAGAACGGGTCTTTCGGGTCTCTCAAATGACAAGAAAGTATACAAAAAACTCGTCAGAGACATGATTATTCAGGGTTTACTACGCTTGAGGGAACCATCTGTGCTGATAAGATGCAGAGAGAGTGATCGTAAGCTAGTTGAGTCCTTGATAGAGGAAGCCAAAAAAGAATATTCAGAGAAAGCAAACGTGCAAGCCCCAAAAATTACCCTTGATGATCGTGTTTTTCTCCCACCACCACCTAAGAAAAATGCTGCCACGGATTCCCACGAACCTTTTTGCTCTGGAGGAATAGTGTTGGCCTCAGAGGATGGGAAGATTGTGCTGGAAAACACCCTCGATGCACGGTTGGATGTTATTTTTCGACAGAAACTGCCCGAGGCATGTTCTTGTTGA 681 0.4258 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLEILEAEKKKIKQEYERKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAVNSMKDAARTGLSGLSNDKKVYKKLVRDMIIQGLLRLREPSVLIRCRESDRKLVESLIEEAKKEYSEKANVQAPKITLDDRVFLPPPPKKNAATDSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRQKLPEACSC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02371 226 Gene3D - 92 226 IPR038495 -
Vimu5g02371 226 SUPERFAMILY V-type ATPase subunit E-like 87 223 - -
Vimu5g02371 226 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 223 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu5g02371 226 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vimu5g02371 226 Coils Coil 14 61 - -
Vimu5g02371 226 Gene3D - 1 62 - -
Vimu5g02371 226 Pfam ATP synthase (E/31 kDa) subunit 16 222 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02371 Vimu-Chr5 34483093 34484290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02371 1 221 Primary Pumps ATPases(2) AT4G11150 68.778 1.36e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02371 K02150 - gmx:100791813 368.237