Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02289 ATGGCTACTTCCGACACCACCGCCACCAAGCTTCCCCTCAAGGAGATTCCCGGAAGCTACGGCCTCCCCTTCTTCGGACCCATGAGTGACAGACACGACTACTTCTACCACCAGGGACGCGACAAGTTCTTCGCCGACCGAATCCAAAAGTACAACTCAACTGTCATCAGGACCAACATGCCACCTGGTCCCTTCATTTCCTCAGACCCTAAAGTCATCGCTCTCCTCGACGGCGTCTCCTTCCAAATCCTCTTCGACAACTCCAAGGTCGACAAGCGCGACGTCCTCGACGGCACCTTCATGCCTTCCACCTCTTTCACCGGCGGCTACCGCGTCTGCGCCTTCCAGGACACCACCGAGCCCTCCCACGCGCTCCTCAAGACCTTCTACCTCAACCTCCTCGCCTCCAAGCACGCCTCCTTCATCCCGCTCTTCCGCAACAACCTCTCAGAACACTTCGCTGACCTCGAGGACCAGCTCGCCGGAAGATCCTCCAAGGCCAACTTCAACGCCTCCGTCGGCTCCGCCTCCTTCAACTTCCTCTTCCGTCTCCTCACCGGTCAAGACCCCTCCGCAACCAAAATCGGCTCCGACGGCCCCACCCTCGTCACGACCTGGCTCGCGGCGCAGCTCGCTCCTCTCGCCACTCTAGGTCTACCCAGGATTTTCAACTACGCAGAAGATTTCCTTATCCGAACAATCCCCTTGCCTGCGTGGACTGTTAAATCCAGCTATAAGAAACTCTTCGAGGGTTTTGCCAGCGCGGGTTCTTCCGTTCTGGACGAAGCGGAGCGGTTGGGGATAAAGAGGGACGAAGCTTGCCACAACCTTGTGTTCATGTTAGGGTTCAACGCGCAGGGAGGGTTGGTGAACCAGTTTCCGATTCTGTTGAAGTGGGTTGGGTTGGGCGGCGAGAGTTTGCACAGACAGCTTGCAGAGGAAATCAGGAGCGTTGTTAAGGAAGAAAACGGGGTGAGTCTCCGTGCGTTGGATAGGATGACTTTGACTAAATCCGTGGTGTACGAGGTGATGAGGATAGAGCCGGCGGTGCCGTTCCAGTACGGGAAGGCCAGGGAAGATCTTGTGGTGGAGAGCCACGATGCGGCGTACGTGATCAAGAAGGGTGAGATGATCTTTGGATATCAGCCGTTCGCTACGAAAGACCCTAAGATCTTTGAGAGAGCGGAGGAGTTTGTGGCCCACAGGTTTGTTGGGCCTGATGGAGAAAAGTTGTTGAACCACGTGTTGTGGGCTAACGGCCGCGAGACGGAGGAGCCCACGCCGGATAATAAACAGTGTCCCGCGAAGAATCTGGTGGTGCTCCTGTGCAGGCTATACTTGGTGGAATTCTTCCTACGATACGATACTTTTACGTTCGATTTTAAACCTGTGGTTCTAGGTCCCCAGGTGACCATCAAGTCACTGGTGAAATCATCTTACTGA 1443 0.5551 MATSDTTATKLPLKEIPGSYGLPFFGPMSDRHDYFYHQGRDKFFADRIQKYNSTVIRTNMPPGPFISSDPKVIALLDGVSFQILFDNSKVDKRDVLDGTFMPSTSFTGGYRVCAFQDTTEPSHALLKTFYLNLLASKHASFIPLFRNNLSEHFADLEDQLAGRSSKANFNASVGSASFNFLFRLLTGQDPSATKIGSDGPTLVTTWLAAQLAPLATLGLPRIFNYAEDFLIRTIPLPAWTVKSSYKKLFEGFASAGSSVLDEAERLGIKRDEACHNLVFMLGFNAQGGLVNQFPILLKWVGLGGESLHRQLAEEIRSVVKEENGVSLRALDRMTLTKSVVYEVMRIEPAVPFQYGKAREDLVVESHDAAYVIKKGEMIFGYQPFATKDPKIFERAEEFVAHRFVGPDGEKLLNHVLWANGRETEEPTPDNKQCPAKNLVVLLCRLYLVEFFLRYDTFTFDFKPVVLGPQVTIKSLVKSSY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02289 480 PANTHER CYTOCHROME P450 26 11 455 - -
Vimu5g02289 480 CDD CYP74 47 473 - -
Vimu5g02289 480 Gene3D Cytochrome P450 11 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02289 480 Pfam Cytochrome P450 309 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02289 480 SUPERFAMILY Cytochrome P450 11 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02289 480 FunFam Allene oxide synthase, chloroplastic 11 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02289 Vimu-Chr5 33907052 33908581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02289 6 480 Cytochrome P450 AT5G42650 51.050 1.72e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02289 K01723 - gmx:100810890 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02289 5 33907052 33908581 Vimu5g02289 5 33907052 33908581 ECH