Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g02262 | ATGGAAGATCATTTTTCCCCAAAGGGGAAGGAAACTGGCTATTGCACATCTCCTTGTACCCAGTTGGAGGAATCAACATCGGTTGATGGTGGGATGAAAAAATCTGCTTCAGAGGACATGTTTAGCAACTTCTCTGAGCTCATGAACTTTGATACCTATGCTGGTTGGAGCAATAGTTCATCTATGACTTATCAGAGTTTGGCAAATGTGTTTTCATCATTTTCCTCAGCATCATATCCACCATCCGATGGATTGAATCTGGTGGAACATGGCAATGGTCCATGCTTTATGACAGAAGTCAGTGAAATTCACAATGGTATAAAAAGTTCTCCTAGTTGTGAAGAAAGAGGTATATTTCAGCAAATGGACATCCAACTTGGTTTCTTAGATGAAGCAAATGATTCAAATAGCTTTGATTCAAAACAAAATCGTAATGGTTTATATCAGCAACTTAATACCTCAGACATGTGCAATTACATGATCTCAAGGTCATCAGGGAGGCCACTTGATGATAGAATGTTGAGGGCTTTGTCCTTTTTTATGGAATCAGTTGATGAGGGAATGCTGGCACAAGTTTGGGTACCTATAAAGCATGGTGATGAATTCATCTTATGCACAAGTGAACAACCTTATTTGTTAGATCCAAAGCTTGCAGGGTATCGAGAGGTGTCAAGGGCATTCACATTTTCTGCAGAAGGAAAGAAAGGATCATGTCCGGGGCTTCCTGCACGAGTGTTTACATCACATGTTCCTGAATGGACTTCCAATGTTGGCTACTATAATAAAACTGAGTACTTAAGGTTGGACCATGCATTGAATCATGATATTCGTGGATCTATTGCTCTTCCTGTTTCTGATATGCATTCTCATGAGCCATGTGCTGTATTGGAACTGGTCACTACAAAGGAAAAACCTAATTTTGACAGAGAATTAGAAATTGTTACTCATGCACTTCAGATATTTCCATATTACGTTATCATCGAAGGTGCTAATGATAAATATCCTTATGATGACATTATGCAGCTTGTAAATTTAAAGACTACTATGCCTCCACGACTTCTTCCCCAGGTGTTTTTGAGTAAAAAATTCTTGTTGTCTTTGCCACTACATCTGCCGTTGTCGGTGGTGGCACCATCTACTACTACCAGCGGCGACCACCGTGCCATCAGACGATTTCATCGGAGCTCTTATGCGCTCTTAGCGCCTTTTGAAATTGCGGATATGCTTTCTTTTCCGTTGTGCGTGTCCGTCTCATCTCCTCTTAGACAGCAATTCAGAGTGTCGAAGTCACTCTTTTTTCTTTTTCAGTGTCTATCAAGTAACAAAAGAGCTGCTTTAACAGAGATAGTTGATGTGTTACGTGCCGTGTGTCATGCACATAGATTGCCACTGGCACTGACATGGATTCCCTGTTGCTACAGTGAGGGAATAGGAGATGAAGCTGAGAGAATACGAATCAAAGAAGGTCATACAAGTTCTGACGAAAAGTGTGTGCTATGTATTGAGGAATCAGCTTGCTATATAAATGATGGAGCAATAGGAGGATTTGTCCATGCTTGCGTTGAACATCATCTTGAGGAAGGGCAAGGTATAGCAGGAAAAGCTCTTCAATCAAATCATCCATTCTTCTACACTGATGTGAAGACATATGATATTAGTGAATACCCCCTTGTTCATCATGCACGCAAATATAACTTGAATGCTGCAGTTGCAATTCGGCTAAGGAGTACCTATACCAATGATGATGATTACATATTAGAGTTCTTTCTGCCAGTGAACATGACAGGGAGTTCAGAACAACAACTTTTACTGGATAATCTCTCAGGTACCATGAGGAGAATTTGTAGGAGTTTGAGAACAGTTTCAGATGCTGAAATAACAGGAATAGAAGGATCCGTAGCTGGGTTTCCAAAGGAAAAGCTCACATATTTTTTTCCCATGTCCAGAAGAAACTCTCAGATAGCATTTATAAATGATGATCATGATTCGAATCAGAAGATGGCCTTGAAGACATCTAGCAATGGAATTGAAGCTGTTCATGGCCAGGTAATGAATGGACCAAGAAAACAGATTGAGAAAAAGAGAAGTACAGTGGAGAAGAATGTTAGTTTGAGTGTTCTACAACAGTACTTCTCTGGTAGTCTGAAAGATGCTGCAAAAAGCATTGGTGTTTGCCCAACAACTCTAAAAAGGATATGCAGGCAACATGGAATTTCAAGATGGCCATCTCGGAAGATCAATAAAGTGAATCGTTCATTAAAGAAGATACAGACTGTGCTTGATTCTGTCCAGGGAGTGGAAGGAGGGTTGAAGTTTGATCCTTATACTGGGGGGTTTATAGCTGGAGGATCACTGATGCAAGAAATTGACACACATAAATATATTCTATTTCCTGAGAGAAGTGCTGTGAAAGACCCTAAGCATGCAACACAAAAACCAGTCTCAGTAGTTTCAGCACCAGGCAGCACTAGTGAGAATTCAACAATTAAGTTGGATGATGATGATGATGATGGTGTTTGTTTGGTGGAAAACAAGATTGTAGACTCAAGAAGTGCACTTTTATCTAATACCAGTGTGGGAGGATTTAAAAAAGACAATGCTTCTTCTGATGATTGTTGTGAAGATTCAAAATCAGTGGCCATGAATGATGGATCAAGCCAAAAGGCCAAGAATCAGGATTGTCCTGAACAAACTTGTTCAATATCCTTGGTTACAGATGAGGCTGAAGTTGGAGTGGATGGGGGAGAAGGAATTGAAGAACATAACAACCTTGTAAATTCTTCAAGCACCACAAACTCATCCAATGGCTCTGGCTCAATGATGCATGGCAGCTCATCATGCTCTCAAAGCTTTGAGAACCAAAAGCATTCAAAAGTAAAACCAACTTCTGTCGATAGTGAGTCAAAAATGATTGTGAAAGCTAGCTATAGGGGAGACACTATTCGTTTCAAGTTTGATCCATCCGCAGGTTGTTTCCAGCTATATGAAGAAGTTGCAACAAGGTTCAAACTCCAAAACGGGTTATTCAAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTGGAGAATGACTCAGATTTGCAAGAGTGTGTAGAAATTTTGCATGACATTGGCACACGTTGTGTGAAGTTTCTTGTTCGTGATTCGTGGCAGCAACAATTGCTTCTTGTCAGACAGTTCATAGTGTCTGAAATCATCCATGGCTTCATTGTGGTGTATGTTACTTCTGATAATCCAAATATGAATATAAGTTGCAGGATGAGAAGAGATAGGAAAACCAGTGAGTCAACCTTTTATAGAATTGAGATTGGATTCGAAAGGGAAGAAAAACGAAAAACACGTGTGAAGTATAAAGGTTGGAACAACAGAGAAGAAGCTTCGTGGGCTCCACTTAAACCGTGGGAGAAAGTAGCATCCTCATCTGGGACTGCACCTTTTAGACCCCCATCAGCAGGTAGAACGAGTGATGTAGTTGAGTCTTCAGGAACTGCAAAACCTGGGGAAATAGTTTCAGCTTCCAATAACTCTGCAACTGTCAATAGGAATGCTCTTGGAAGACCCCTTCCCACAAGGCCTTGGGAGCAGAATTATGGAACTACCAGCTATGGAGGTTATGGTTCTACAATGAACTACAATTCTGGATATGGATCTTATGGTGGAGTGGGAGGGTTTAGGGGTGGAGGAATGTATGGCAACAGTATGTACGGGGGAGGATATGGGGGGCTTTATGGGTCCTCTGGGATGTATGGAGGGGGAATGTATAATGGTGGCTTTGGTGGTCCTATGGGTGGTTATGGCCTGGGTGGTGGTCCTTATGGAGCTGAAGATCCCAATAATCCATATGGTGCTCCTTCATCGCCTCCAGGATTTTGGATTTCTTTTATACGTGTGCTTTTTGACCGGTCTGGTGTATTATATGGAGAGCTAGCTAGATTTGTGTTACGGTTGCTTGGAATCAAAGCTAAACCCAAGAAGATTAACCCTCCAGGTCCTGATGGACTTCCACTGCCTGGGCCACACACTTCCTCTGTAAATCAGAACTATATTGAGGGACCAAAGGCTGCTCCAAGTGGTTCCTGGGACAATGCATGGGAATATGATACCAATAAGTGA | 4119 | 0.4134 | MEDHFSPKGKETGYCTSPCTQLEESTSVDGGMKKSASEDMFSNFSELMNFDTYAGWSNSSSMTYQSLANVFSSFSSASYPPSDGLNLVEHGNGPCFMTEVSEIHNGIKSSPSCEERGIFQQMDIQLGFLDEANDSNSFDSKQNRNGLYQQLNTSDMCNYMISRSSGRPLDDRMLRALSFFMESVDEGMLAQVWVPIKHGDEFILCTSEQPYLLDPKLAGYREVSRAFTFSAEGKKGSCPGLPARVFTSHVPEWTSNVGYYNKTEYLRLDHALNHDIRGSIALPVSDMHSHEPCAVLELVTTKEKPNFDRELEIVTHALQIFPYYVIIEGANDKYPYDDIMQLVNLKTTMPPRLLPQVFLSKKFLLSLPLHLPLSVVAPSTTTSGDHRAIRRFHRSSYALLAPFEIADMLSFPLCVSVSSPLRQQFRVSKSLFFLFQCLSSNKRAALTEIVDVLRAVCHAHRLPLALTWIPCCYSEGIGDEAERIRIKEGHTSSDEKCVLCIEESACYINDGAIGGFVHACVEHHLEEGQGIAGKALQSNHPFFYTDVKTYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMTGSSEQQLLLDNLSGTMRRICRSLRTVSDAEITGIEGSVAGFPKEKLTYFFPMSRRNSQIAFINDDHDSNQKMALKTSSNGIEAVHGQVMNGPRKQIEKKRSTVEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPYTGGFIAGGSLMQEIDTHKYILFPERSAVKDPKHATQKPVSVVSAPGSTSENSTIKLDDDDDDGVCLVENKIVDSRSALLSNTSVGGFKKDNASSDDCCEDSKSVAMNDGSSQKAKNQDCPEQTCSISLVTDEAEVGVDGGEGIEEHNNLVNSSSTTNSSNGSGSMMHGSSSCSQSFENQKHSKVKPTSVDSESKMIVKASYRGDTIRFKFDPSAGCFQLYEEVATRFKLQNGLFKLKYLDDEEEWVMLENDSDLQECVEILHDIGTRCVKFLVRDSWQQQLLLVRQFIVSEIIHGFIVVYVTSDNPNMNISCRMRRDRKTSESTFYRIEIGFEREEKRKTRVKYKGWNNREEASWAPLKPWEKVASSSGTAPFRPPSAGRTSDVVESSGTAKPGEIVSASNNSATVNRNALGRPLPTRPWEQNYGTTSYGGYGSTMNYNSGYGSYGGVGGFRGGGMYGNSMYGGGYGGLYGSSGMYGGGMYNGGFGGPMGGYGLGGGPYGAEDPNNPYGAPSSPPGFWISFIRVLFDRSGVLYGELARFVLRLLGIKAKPKKINPPGPDGLPLPGPHTSSVNQNYIEGPKAAPSGSWDNAWEYDTNK | 1372 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g02262 | 1372 | Pfam | RWP-RK domain | 701 | 749 | IPR003035 | - | |
| Vimu5g02262 | 1372 | MobiDBLite | consensus disorder prediction | 806 | 830 | - | - | |
| Vimu5g02262 | 1372 | MobiDBLite | consensus disorder prediction | 921 | 957 | - | - | |
| Vimu5g02262 | 1372 | Gene3D | - | 965 | 1048 | - | - | |
| Vimu5g02262 | 1372 | PANTHER | PROTEIN NLP8 | 137 | 1051 | IPR045012 | GO:0003700 | |
| Vimu5g02262 | 1372 | ProSiteProfiles | RWP-RK domain profile. | 681 | 769 | IPR003035 | - | |
| Vimu5g02262 | 1372 | SMART | PB1_new | 969 | 1051 | IPR000270 | GO:0005515 | |
| Vimu5g02262 | 1372 | MobiDBLite | consensus disorder prediction | 873 | 895 | - | - | |
| Vimu5g02262 | 1372 | MobiDBLite | consensus disorder prediction | 1141 | 1199 | - | - | |
| Vimu5g02262 | 1372 | MobiDBLite | consensus disorder prediction | 1329 | 1372 | - | - |
Showing 1 to 10 of 17 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu5g02262 | - | - | gmx:100793770 | 1028.85 |
Showing 1 to 1 of 1 entries