Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02167 ATGGAGATAATCTCAAGCTTCCACAGAGACCTCAATGACATGAGGGAGTATTATGAGAGTGGAAAGACTAAGCAAGCATCTTGGAGAGAATCTCAGCTCAAAGCCTTGCGTTGCTTCCTCATGGAAAAACAACAACATATCATGGAGGCCCTTATGCAGGATCTTGGCAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGGACTTTGATCAAGACCTTAAATCTGGCATTGAAGTCTTTGAAAGCTTGGATGTCAGGCAAAAAGGCTGAATTGCCACAAGTAGCATTGCTCACCAGTGCAGAAATTGTTTCAGAACCACTTGGTTTGGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGACTATCCTTGGAGCCACTTATTGGAGCAATAGCTGCGGGAAACGTGGCAATCTTAAAGCCTTCAGAGTTGTCTCCAGCTTCTTCTTCTCTTCTCTTTTCCAGTCTCACCTCTTATTTGGACAATAAAGCCATTAAGGTGATCCAAGGAGGACCACAAGAGACCCAACAACTACTAGACCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGCGGATTGTTATGTCTGCTGCTGTGAAGAATTTGACTCCTGTGACTTTGGAGCTGGGTGGAAAATGCCCTGCAGTTGTTGACTCCCTTTCATCTTCCTGGGATATAGAGACCACTGTGAAGAGAATTATTGTGGGAAAATTTGGGACTTGTGCTGGTCAAGCATGCATAGCCATTGATTATGTCCTGGTGGAAAATAAGTATTGCTCAAAACTGGTGGAACTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCTCAACGTTCCAAAACTATCACCAGGATAGTTAACAAACACCACTTCTCTAGATTGAACAACCTTCTTGCTGATAAAATGGTCAAAGAATCAGTGGTTTATGGTGGCTCAGTGGACGAAGAAAACTTATTTATTGAGCCAACCATCTTGGTGGATCCCCCACTGGACGCAGCAATTATGTCAGAAGAGATTTTTGGACCATTACTTCCAATTATTACTGTAGAGAAGATTGAGGACAGTATTAGATTCATAAGGAGTAGGCCTAAGCCTCTTGCCCTTTATGTCTTCACCAAAAACAAAACCCTAGAGAAAAGAATGATATCTGAAACATCATCTGGCAGTTTAACTTTCAATGATGCAATACTACAATATGCAGCTGACTCTCTTCCATTTGGAGGAGTGGGAGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTTAGCCACCAGAAGGCAATAGTAAGAAGAAGTTTTCTCACTGATTTCTGGTTTAGATATCCTCCATGGACACTAAATAAGTTGCAACTACTTCAAGAGTGTTACAATTATGATTATCTGGGGATGCTCCTTGTCATGCTGGGCTTGAAGAGATCATCAAAACACTTATTTGCAAATCATATGTAG 1482 0.4184 MEIISSFHRDLNDMREYYESGKTKQASWRESQLKALRCFLMEKQQHIMEALMQDLGKHQLEAFRDEIGTLIKTLNLALKSLKAWMSGKKAELPQVALLTSAEIVSEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNVAILKPSELSPASSSLLFSSLTSYLDNKAIKVIQGGPQETQQLLDQRWDKIFFTGSARVGRIVMSAAVKNLTPVTLELGGKCPAVVDSLSSSWDIETTVKRIIVGKFGTCAGQACIAIDYVLVENKYCSKLVELMKVWIKKMFGENPQRSKTITRIVNKHHFSRLNNLLADKMVKESVVYGGSVDEENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIRFIRSRPKPLALYVFTKNKTLEKRMISETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWFRYPPWTLNKLQLLQECYNYDYLGMLLVMLGLKRSSKHLFANHM 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02167 493 PIRSF ALDH 2 477 IPR012394 GO:0006081
Vimu5g02167 493 FunFam Aldehyde dehydrogenase 216 419 - -
Vimu5g02167 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Vimu5g02167 493 SUPERFAMILY ALDH-like 14 456 IPR016161 GO:0016491
Vimu5g02167 493 PANTHER ALDEHYDE DEHYDROGENASE 6 481 IPR012394 GO:0006081
Vimu5g02167 493 FunFam Aldehyde dehydrogenase 15 219 - -
Vimu5g02167 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Vimu5g02167 493 Pfam Aldehyde dehydrogenase family 17 439 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02167 Vimu-Chr5 33074257 33076706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02167 6 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.556 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02167 K00128 - gmx:100817701 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00468 4 3376118 3379139 Vimu5g02167 5 33074257 33076706 PCT