Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02163 ATGGCCTCTTTAGCACTCACCACCACCCTCCCCTCTCTCCGCCTCCGCCGCAACACCGCCGCCGCCGCCGCCCTCAAACCCAACCGTCTGACTTCCCTTCCACGTTCCTCACTCAAACCAAACCTCAGCACTTCGATTTCTTCCTTCCCAAATTTCTCACTTAGAAAAACGAACCTCGCTCTCACTCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGCAGCCTCCATCACTCCGGCGCCGGCACCGGCACCGGCGCCGGTTCAGCCATGGCAAGGTGCCGCAATAAAACCCCTATTGGCCTCCATCGCCACGGGAGTGATCCTCTGGTACACACCAGTTCCCGCGGGCGTAAACCGTAACGCGTGGCAATTGCTCGCGATCTTCTTAGGCACAATCGTCGGCATTATAACCCAACCGCTGCCCCTCGGCGCGGTTGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTAACGTTCGCCGCCGCGTTCTCCGGCTTCGGGGACCCGATCCCCTGGCTCATCGCACTCGCCTTCTTCTTCGCCAAGGGATTCATTAAAACTGGCCTCGGGAACCGCGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCGCTCGGGTTAGGATACAGTCTTGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATCCCCTCAGTGTCGGCGAGGGCGGGCGGGATATTCCTCCCGCTCGTAAAGGCGCTGTGTGTGGCGTGCGGGAGCAACGTTGGCGACGGGACGGAGAACAGGTTGGGGGCTTGGCTCATGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTAACGGCGATGGCGGCGAATCCGCTCTGCGCGACGCTGACGCAAAATTCCATTAACCAGACCATTGGATGGTTGGACTGGGCTAAAGCTGCAATTGTCCCTGGCTTGGTGTCGTTGGTGTTGGTTCCGTTGATTTTGTACGTTATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAGAGAGAAGTTGGAGAAAATGGGGCCCATGACAACCAATGAGAAGATCATGACTGCTACCTTGTTTGTCACGGTAGGACTTTGGGTATTTGGAGGACTTCTTAATGTTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGAGTTGTTACATGGAAGGAGTGCTTAGGGGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACGGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTAGTTCTTCTCTACTTTTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGGGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCGCCATTCTTCGGAGCCATAGTGCTGTCGTTCCTCTCCAACCTTATGGGTGGTCTTACTCATTACGGAATTGGATCAGCTCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAATTCATTGGCTTATGGTGA 1686 0.5291 MASLALTTTLPSLRLRRNTAAAAALKPNRLTSLPRSSLKPNLSTSISSFPNFSLRKTNLALTRKHSSLTVRATAASITPAPAPAPAPVQPWQGAAIKPLLASIATGVILWYTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNVGDGTENRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFVTVGLWVFGGLLNVDAVSAAILGLSVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02163 561 NCBIfam DASS family sodium-coupled anion symporter 113 555 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vimu5g02163 561 Pfam Sodium:sulfate symporter transmembrane region 98 561 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vimu5g02163 561 CDD ArsB_NhaD_permease 133 555 - -
Vimu5g02163 561 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 68 561 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02163 Vimu-Chr5 33035308 33038278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02163 10 560 Antiporters AT5G12860 80.179 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02163 - - gmx:100796365 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02163 5 33035308 33038278 Vimu5g02163 5 33035308 33038278 ECH