Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02156 ATGGATGAACACATGCACGGGATGGGAGGGATGGCGCCGTCGCCGCCGTCAACCGCAAACAACACCATGGGCTCCATGATGCACCATAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACTGATATTCTCTTCCAAAACTGGCCCGGAGGCAAATCGGATATGTATATCTTGGCCCTCGTTTTCGTTTTCGTCATGTCGGTTTTCGTGCAGTTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCGGCCGGTCTGTTCAAGACCCTCTTGTTCGCTTTCAGGGTTGGTCTGGCTTATCTGGTTATGCTTTCAATCATGTCTTTTAATGGTGGCGTTTTCTTGGTTGCTGTGCTAGGTCAGACCTTGGGGTTTCTCATTACCACATTCGCTTTCAGCAAATCGCCCCATGACGAGGGTTTCGATCTTCCTCCAATTTCTTGTTGA 465 0.4989 MDEHMHGMGGMAPSPPSTANNTMGSMMHHKMMMHMTFFWGKDTDILFQNWPGGKSDMYILALVFVFVMSVFVQLLSHTRFIKPGSNHVAAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLITTFAFSKSPHDEGFDLPPISC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02156 154 Pfam Ctr copper transporter family 87 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu5g02156 154 Pfam Ctr copper transporter family 35 79 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu5g02156 154 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 24 142 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02156 Vimu-Chr5 32972341 32974162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02156 3 154 Inorganic Solute Cotransporters AT5G59030 40.828 2.08e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02156 K14686 - gmx:100306175 252.677