Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02092 ATGCTAACACTGTATTCAACATGGTTCTTGCGGTCACTTTCATCCTCTCCTGCATGTGCCGGTACCTACGAAAAGTTAAATTTGCAAACAGTAGCAGGGAAAGCTAAGGTGATGGGAACGACAATTGGAGTTAGCGGGTCAATGATGTTGTCATTCTTCAAAGGAATAGAAATAAAAATTTGGAAGAATATGCACATTAATCTTATGCATAAAACGGACCACAATCAAACAAGAGCATCTGATGGAAAAGAGTGCATAGGTATTTTAAGTGGTCTTGGATGTTGCTTGAGTTTTTCAGTATGGCTCATCATTCAGGTATATGGAATTGCGATCAATGCATTTGTGAATATTGTCACTTTATGGTGTGTACACAAGAGAGGTCCATTATATGCATTTGTATTCAATCCCCTTACTCTTGTGCTCGTGGCTGCCACTGCTCCCCTCTTATTACAAGAGAAACTATACCTTAGAAGGTATACACTATTTCTTTTGCACCATATTTTCATTTAA 510 0.3824 MLTLYSTWFLRSLSSSPACAGTYEKLNLQTVAGKAKVMGTTIGVSGSMMLSFFKGIEIKIWKNMHINLMHKTDHNQTRASDGKECIGILSGLGCCLSFSVWLIIQVYGIAINAFVNIVTLWCVHKRGPLYAFVFNPLTLVLVAATAPLLLQEKLYLRRYTLFLLHHIFI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02092 169 PANTHER WAT1-RELATED PROTEIN 15 106 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02092 Vimu-Chr5 32630517 32631590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02092 24 156 Nodulin-like Gene Family AT1G68170 27.568 2.76e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02092 - - vum:124820047 199.134