Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02046 ATGATTCTTGAGTCCCTCTTACTAGTTGTGAGTATCTTCCTCTGTGCTTGTCTTTTCAAAAACTTGTTTGAGAGAAGAAAAAAGCCCAAAGCCCACTTGAAGCCCCCTCCAAGCCCACCAGCCCTACCGGTAATCGGTCACCTCCACCTGCTTAAACCCCTCATCCACCACGCATTCCAAGAACTTTCTCTCCGATATGGGCCTCTTATATACCTTCGAATAGGTTCTGAGAAGTTCATAGTTGCAAACACCCCTTCACTCGCCAAAGAATTTCTCAAGACCAATGAGCTCACATACTCTTCTCGCAAAATGAACATGGCCATCAACATGGTTACCTACCACAACGCTACGTTCGCGTTTGCCCCTTACGACACTTACTGGAAGTTCATGAAAAAGCTCAGCACCACTGAGCTCTTGGGAAACATAACCCTTCAGCAGTTCCTACCGATTCGGACAAGGCTCGTTCACGAATTCCTCCAAACTCTTTTCCAGAAATCGAAGGCCAAAGAAAGCGTGAACCTCACCGAGTCACTCATTAGGCTTTCCAACAACGTGATATCGCAGATGATGCTCAGCATCACGAGCTCCGGAACAGACAGCCAGGCGGAGCAGGCACGTGCGTTGGTTCGTGAAGTGACGCAGATTTTCGGGGAGTTTAACGTTTCGGATTTCATAGGTTTCTGCAGGAACTTGGATTTGCAAGGTTTCAGGAAGAGGGCATTGGATATACATAAGAGGTACGATTCTCTGCTAGAGAAGATCATCTCTGATCGTGAAGAACTGCGAAGGGAATCGAAGGTTGAGCGTTGTGAAGACGGAGAAGAGAAAGTGAAGGACTTTCTCGATATTTTGCTGGATATTGTTGAACAGAAAGACTTGGAGGTTGAGTTAACTCGGAACCATGTCAAATCATTGATCTTGGATTATTTCACAGCAGCTACTGACACAACTGCTATATCAGTAGAGTGGGCAATAGCAGAACTGTTGAACAATCCAAAGGTGCTGCAGAAAGCACAAGAGGAGGTGGACAGAGTGACTGCAAACAAGAGATTACTGTGTGAAGCAGACAGTGAAAAGCTTCCTTATATCCATGGCATCATAAAAGAAACAATGAGGCTTCATCCACCAATACCAATGATTATGAGAAAGGGAATCAAAGACTGTGTGGTTAATGGAAACATGATTCCAAAGGGTTCAATAGTTTGCCTAAACATTTGGGCTATGGGAAGGGATCCAAGTATCTGGGAGAAGCCTTTGGAGTTTAAACCAGAAAGGTTTGTAGAAGGTGAAGGAAAAGATCTTGATCTGAAAGGGCACCATTTTGAGTTGTTGCCATTTGGCAGTGGAAGAAGAGGGTGTCCTGGTATGCCTTTGGCCATGCGTGAATTGCCTACAATCATTGGAACACTCGTGCAGTGTTTCGAGTGGAAGATGTTTGGTTCTGAAGGTGAAATCTTGGAGCATGGAAGAGGCAAAATCAACATGGATGAACGACCAGGCTTGACTGCTCCAAGAGCTAATGATCTTGTATGCATCCCTGTTGCACGATTAGATCCTACTCCTTTTCTTCAACTCTAG 1578 0.4512 MILESLLLVVSIFLCACLFKNLFERRKKPKAHLKPPPSPPALPVIGHLHLLKPLIHHAFQELSLRYGPLIYLRIGSEKFIVANTPSLAKEFLKTNELTYSSRKMNMAINMVTYHNATFAFAPYDTYWKFMKKLSTTELLGNITLQQFLPIRTRLVHEFLQTLFQKSKAKESVNLTESLIRLSNNVISQMMLSITSSGTDSQAEQARALVREVTQIFGEFNVSDFIGFCRNLDLQGFRKRALDIHKRYDSLLEKIISDREELRRESKVERCEDGEEKVKDFLDILLDIVEQKDLEVELTRNHVKSLILDYFTAATDTTAISVEWAIAELLNNPKVLQKAQEEVDRVTANKRLLCEADSEKLPYIHGIIKETMRLHPPIPMIMRKGIKDCVVNGNMIPKGSIVCLNIWAMGRDPSIWEKPLEFKPERFVEGEGKDLDLKGHHFELLPFGSGRRGCPGMPLAMRELPTIIGTLVQCFEWKMFGSEGEILEHGRGKINMDERPGLTAPRANDLVCIPVARLDPTPFLQL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02046 525 Pfam Cytochrome P450 36 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 SUPERFAMILY Cytochrome P450 36 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 Coils Coil 335 355 - -
Vimu5g02046 525 FunFam Cytochrome P450 family protein 27 511 - -
Vimu5g02046 525 CDD CYP93 67 513 - -
Vimu5g02046 525 Gene3D Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vimu5g02046 525 Coils Coil 244 264 - -
Vimu5g02046 525 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g02046 525 PANTHER STEROID 21-HYDROXYLASE-RELATED 13 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02046 Vimu-Chr5 32292207 32296494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02046 36 516 Cytochrome P450 AT5G06900 40.994 6.13e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02046 K23179 - gmx:100783503 875.93