Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02036 ATGCCGAGAAAAGGAATGAGAAGCATTTTCTTCAGGCCTTCATCTTCTCCTTCATCCTCCACCTCATCACAACCACCTCCCTCCCCTCTCCGCACATTTTCAGACTCCTTAATGGAACAGAACATACAAATCGCAGAGGCTCTCGTTACCAAATGGGACGATTCCAAACTCGGAACGCCGCTTTTTAGCGGCACGCGCCAGGAAGCCAGAAAGTACCTTGACGCTGTAAAGGGACTACAATCCGCTATGCAGTACTTCGTTGCACAGGATTCTACCTCCGCCACTCTTGTGCGCGCTCAGTTCCTCATGCAGCTCGCCATGAAGACGCTTCAGAGAGAGTTTTACCAGATTCTTTCCTCCAACAGAGACCACCTGGATCCTGAAACTGTCTCCGCCCGCTCCTCCATTGATCTCCGCAGCAGCGTCTCTGAGTACGTTTCCGATTACGACGACGAAATCACAGCCTCCGAGGATGACTTCCGCATCTCCGAGACCGAGCGTGTGTCAATGCTCGCCATGGAGGATTTGAAAGCCATTGCGGATTGCATGATTTCCTCCGGCTACGGGAAAGAGTGCGTCAACGTTTACATCCTCATGAGAAAATCTATTGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAATTGAGCCTCGCTCGGGTTCAGAAACTGGACTGGGAGGTTCTCGAGTTGAAGATCAAGAAATGGTTGAACGCTGTTAAAGTCGCCGTTGGAACTCTCTTCCACGGCGAGAGAATCCTCGCTGACCACGTCTTCTCCTCGAATCCCGAAAAGAGGATCTCGGAATCCTGTTTCGCTGAAATCACCAAAGATGGCGCCGTTTCGCTGTTCGGATTCCCTGAAATGGTGGCGAAGTGTAAGAAATCGCCGGAGAAAATGTTCAGGACGTTGGATTTATACGAAGCGATCTCTGACCGGTGGACTCGGATCGAATCCATATTCTCTTTCGAATCCACGTCTGCCATTCGCTTACAGGCCATTACGTCCATGGTGAAACTCGGAGAAGCCGTTAGAACGATGCTAACGGACTTCGAAACTGCGATTCAGAAGGACTCCTCCAAGACAACGGTCCCTGGCGGTGGGGTCCACCCTCTCACGCGCTACGTGATGAACTACCTAACTTTCCTCGCCGATTACAGCGGGGTGTTAGTTGATATAATCCCTGATTTGCCGCAATCACCGTTGCCGGAGTCTTACTACCGTAGCCCGATGCATGACGAAAACCCGCCGGCGTCGGAGTTATCCGAGAAAATCGCGTGGCTCATCCTCGTTGTGCTGTGCAAGCTCGACGGAAAAGCGGAATTCTACAAGAACGTAGAGCTTTCATACCTGTTTCTGGCTAACAACATGCAATACGTCGTGAGTAAGGTGCGCAGATCGAACCTAGGGTTCCTTCTCGGAGAGGAGTGGTTGGCGAAGCACGAGTTGAAGGTTACTGAGTACGCGTCCAAGTACGAGCGCGTCGGGTGGAGCAAGGTGTTCGCGTCGTTACCGGAAAATCCAGCGGCGGAGGTGAAGGTGGAGCAGGCAAGGACCCACGTCATGAAGTTCGACGCTGCGTTTCATGAAACGTGCAGAAAACAGTCGTCGTGGGTGGTATCCGACCCGAAACTGAGAGACGAAATCAAAGGCTCGATAGGTTCGAAGCTGATGCAAAAGTACAGCGAATTTTACGAGAAGAATCGGGTCGGGTCAAAGTCCGTTCGGTTTATTTTGCCCGAAGATATTGGGAAAAACTTGTCCAACATTTTGTGCGGGAATGGAGATTCGGGAAGTGTCTCCTCACATTCTTCGTCAACAACGTCGTCTTCCCATCGCTCTAATCGGCGGTGA 1854 0.5151 MPRKGMRSIFFRPSSSPSSSTSSQPPPSPLRTFSDSLMEQNIQIAEALVTKWDDSKLGTPLFSGTRQEARKYLDAVKGLQSAMQYFVAQDSTSATLVRAQFLMQLAMKTLQREFYQILSSNRDHLDPETVSARSSIDLRSSVSEYVSDYDDEITASEDDFRISETERVSMLAMEDLKAIADCMISSGYGKECVNVYILMRKSIVDEALYHLGVEKLSLARVQKLDWEVLELKIKKWLNAVKVAVGTLFHGERILADHVFSSNPEKRISESCFAEITKDGAVSLFGFPEMVAKCKKSPEKMFRTLDLYEAISDRWTRIESIFSFESTSAIRLQAITSMVKLGEAVRTMLTDFETAIQKDSSKTTVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIPDLPQSPLPESYYRSPMHDENPPASELSEKIAWLILVVLCKLDGKAEFYKNVELSYLFLANNMQYVVSKVRRSNLGFLLGEEWLAKHELKVTEYASKYERVGWSKVFASLPENPAAEVKVEQARTHVMKFDAAFHETCRKQSSWVVSDPKLRDEIKGSIGSKLMQKYSEFYEKNRVGSKSVRFILPEDIGKNLSNILCGNGDSGSVSSHSSSTTSSSHRSNRR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02036 617 MobiDBLite consensus disorder prediction 596 617 - -
Vimu5g02036 617 MobiDBLite consensus disorder prediction 11 30 - -
Vimu5g02036 617 Pfam Exo70 exocyst complex subunit 234 575 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu5g02036 617 Gene3D Exocyst complex component Exo70 54 598 - -
Vimu5g02036 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 584 IPR004140 GO:0000145|GO:0006887
Vimu5g02036 617 SUPERFAMILY Cullin repeat-like 60 571 IPR016159 -
Vimu5g02036 617 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02036 Vimu-Chr5 32232143 32235345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02036 22 594 EXO70 exocyst subunit family AT5G59730 48.841 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02036 K07195 - gmx:100810579 945.266