Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01975 ATGATATTCAAATATCTACCATATTCCACAGATCCCAATTTAAGCGGTGCCCTTGCCTCGGTACTTTGGGAACTTAATCTTTTGTCCAGCCATTATCATACAGCTATATCAACACTAGCCTCGGGAATTTCAAGTATGAGTACTGCACATAACCAGGTCCTTTTATCCAAGTCCTCTCCTCAACTAGCTTTCAAGGAAATGTCTCTTGACCAAGAATTATGTTTCACACAACGAAGTGGCAGTATAAAATTAAAAAACAAGAAACGAACAAACGGCCCTGCTGCATCCATTGGTTCTACAACTGTTAAGAGCTCATTTGATGACAATGAGTTGCAGAGGAAACTTGTTTCCCATTTCATGGTTCATCATGACATCAAGGAAAATGAAAGGATGAGAAAAGAGCTGGACAGGACTGCATTATCGCTACAGCTATATGAACAATATAAGAAACAAAAGAAACAATCAAAACCAAGGAGATGA 480 0.3875 MIFKYLPYSTDPNLSGALASVLWELNLLSSHYHTAISTLASGISSMSTAHNQVLLSKSSPQLAFKEMSLDQELCFTQRSGSIKLKNKKRTNGPAASIGSTTVKSSFDDNELQRKLVSHFMVHHDIKENERMRKELDRTALSLQLYEQYKKQKKQSKPRR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01975 159 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 146 IPR016903 -
Vimu5g01975 159 Pfam CBF/Mak21 family 4 40 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01975 2 135 Core DNA Replication Machinery Family AT1G79150 49.630 3.48e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01975 K14834 - gmx:100776136 231.491